RNA–Protein interactions for RNA: ENST00000399866.3

LINC02449-202, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 517 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-202ENST00000399866 HOOK2Q96ED9 719 aa9.79□□□□□ -0.84
LINC02449-202ENST00000399866 PYM1Q9BRP8 204 aaKnown RBP9.79□□□□□ -0.84
LINC02449-202ENST00000399866 AMNQ9BXJ7 453 aa9.79□□□□□ -0.84
LINC02449-202ENST00000399866 GLIS2Q9BZE0 524 aaPredicted RBP9.79□□□□□ -0.84
LINC02449-202ENST00000399866 PSTPIP2Q9H939 334 aa9.79□□□□□ -0.84
LINC02449-202ENST00000399866 GGA3Q9NZ52 723 aa9.79□□□□□ -0.84
LINC02449-202ENST00000399866 SSC5DA1L4H1 1573 aa9.79□□□□□ -0.84
LINC02449-202ENST00000399866 CTNND1O60716 968 aaKnown RBP9.78□□□□□ -0.84
LINC02449-202ENST00000399866 PLA2G6O60733 806 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 SLFN14P0C7P3 912 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 TXLNAP40222 546 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 EPS15P42566 896 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 IQCB1Q15051 598 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 USH1GQ495M9 461 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 NBPF12Q5TAG4 269 aaPredicted RBP9.78□□□□□ -0.84
LINC02449-202ENST00000399866 MCTP2Q6DN12 878 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 DTHD1Q6ZMT9 781 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 FAM160B2Q86V87 743 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 FEZ1Q99689 392 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 BPIFA3Q9BQP9 254 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 SYT17Q9BSW7 474 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 ZNF341Q9BYN7 854 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 NAT10Q9H0A0 1025 aaKnown RBP9.78□□□□□ -0.84
LINC02449-202ENST00000399866 RNF181Q9P0P0 153 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 PPP2R3BQ9Y5P8 575 aa9.78□□□□□ -0.84
LINC02449-202ENST00000399866 AP5Z1O43299 807 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 EDIL3O43854 480 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 TDP2O95551 362 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 ADCY5O95622 1261 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 YBX3P16989 372 aaKnown RBP eCLIP9.77□□□□□ -0.85
LINC02449-202ENST00000399866 TAL1P17542 331 aaPredicted RBP9.77□□□□□ -0.85
LINC02449-202ENST00000399866 TRAF1Q13077 416 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 AP3B2Q13367 1082 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 E2F4Q16254 413 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 SH3RF1Q7Z6J0 888 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 POTEDQ86YR6 584 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 DHX40Q8IX18 779 aaKnown RBP9.77□□□□□ -0.85
LINC02449-202ENST00000399866 GRAMD1CQ8IYS0 662 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 SCYL3Q8IZE3 742 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 AOPEPQ8N6M6 819 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 CHURC1Q8WUH1 139 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 TRIM44Q96DX7 344 aaPredicted RBP9.77□□□□□ -0.85
LINC02449-202ENST00000399866 PAGE5Q96GU1 130 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 CCDC34Q96HJ3 373 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 NAP1L4Q99733 375 aaKnown RBP9.77□□□□□ -0.85
LINC02449-202ENST00000399866 ANO3Q9BYT9 981 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 KIAA1683Q9H0B3 1180 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 RANBP17Q9H2T7 1088 aaKnown RBP9.77□□□□□ -0.85
LINC02449-202ENST00000399866 ZNF112Q9UJU3 913 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 FEM1BQ9UK73 627 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 PCDHA5Q9Y5H7 936 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 PITPNM2Q9BZ72 1349 aa9.77□□□□□ -0.85
LINC02449-202ENST00000399866 PAPPA2Q9BXP8 1791 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 PP2D1A8MPX8 630 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L15C9J2P7 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L13C9JLJ4 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L11C9JVI0 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L18D6R9N7 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L22D6RA61 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L17D6RBQ6 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L19D6RCP7 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L20D6RJB6 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 GOLGA6L19H0YKK7 550 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 MEIS2O14770 477 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 WDR46O15213 610 aaKnown RBP9.76□□□□□ -0.85
LINC02449-202ENST00000399866 SLC37A4O43826 429 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 SMC2O95347 1197 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 GCFC2P16383 781 aaKnown RBP9.76□□□□□ -0.85
LINC02449-202ENST00000399866 LMOD1P29536 600 aaPredicted RBP9.76□□□□□ -0.85
LINC02449-202ENST00000399866 INPP5BP32019 993 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 HIRAP54198 1017 aaPredicted RBP9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L24Q0WX57 530 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 CALCRLQ16602 461 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 NT5DC1Q5TFE4 455 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 PPP4R3AQ6IN85 833 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 PDXDC2PQ6P474 469 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 CCDC174Q6PII3 467 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 USP17L6PQ6QN14 398 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 IQUBQ8NA54 791 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 LPAR1Q92633 364 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 SMARCE1Q969G3 411 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 KIFC2Q96AC6 838 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 AK8Q96MA6 479 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 MTMR9Q96QG7 549 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 CCSER1Q9C0I3 900 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 MAN1B1Q9UKM7 699 aa9.76□□□□□ -0.85
LINC02449-202ENST00000399866 BECN2A8MW95 431 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 OPLAHO14841 1288 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 DDNO94850 711 aaPredicted RBP9.75□□□□□ -0.85
LINC02449-202ENST00000399866 STAT6P42226 847 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 AFMP43652 599 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 SARSP49591 514 aaKnown RBP9.75□□□□□ -0.85
LINC02449-202ENST00000399866 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC02449-202ENST00000399866 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 DPYDQ12882 1025 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 MORC3Q14149 939 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 KARSQ15046 597 aaKnown RBP9.75□□□□□ -0.85
LINC02449-202ENST00000399866 PRAMEF18Q5VWM3 479 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 C9orf131Q5VYM1 1079 aa9.75□□□□□ -0.85
LINC02449-202ENST00000399866 ISM2Q6H9L7 571 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms