RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 TMEM179Q6ZVK1 233 aa17.26■□□□□ 0.35
MBD1-209ENST00000398495 LARGE2Q8N3Y3 721 aa17.26■□□□□ 0.35
MBD1-209ENST00000398495 SPDYE2BA6NHP3 402 aa17.26■□□□□ 0.35
MBD1-209ENST00000398495 TDP2O95551 362 aa17.26■□□□□ 0.35
MBD1-209ENST00000398495 SPDYE6P0CI01 402 aa17.26■□□□□ 0.35
MBD1-209ENST00000398495 SF3B2Q13435 895 aaKnown RBP17.26■□□□□ 0.35
MBD1-209ENST00000398495 SPATA1Q5VX52 437 aa17.26■□□□□ 0.35
MBD1-209ENST00000398495 CABP7Q86V35 215 aa17.26■□□□□ 0.35
MBD1-209ENST00000398495 CLRN2A0PK11 232 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 USP27XA6NNY8 438 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 TCP10L2B9ZVM9 353 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 SLC37A4O43826 429 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 SLC1A4P43007 532 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 TNNI2P48788 182 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 CLK2P49760 499 aaKnown RBP17.25■□□□□ 0.35
MBD1-209ENST00000398495 ORC2Q13416 577 aaPredicted RBP17.25■□□□□ 0.35
MBD1-209ENST00000398495 QRICH1Q2TAL8 776 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 GRIPAP1Q4V328 841 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 AK8Q96MA6 479 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 GMLQ99445 158 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 COBLO75128 1261 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 GH2P01242 217 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 PLCG1P19174 1290 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 CDK11BP21127 795 aaKnown RBP17.25■□□□□ 0.35
MBD1-209ENST00000398495 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
MBD1-209ENST00000398495 CSRNP1Q96S65 589 aa17.25■□□□□ 0.35
MBD1-209ENST00000398495 NUP88Q99567 741 aaPredicted RBP17.25■□□□□ 0.35
MBD1-209ENST00000398495 MYH7BA7E2Y1 1941 aa17.24■□□□□ 0.35
MBD1-209ENST00000398495 UQCRHLA0A096LP55 91 aa17.24■□□□□ 0.35
MBD1-209ENST00000398495 UQCRHP07919 91 aa17.24■□□□□ 0.35
MBD1-209ENST00000398495 VIL1P09327 827 aaKnown RBP17.24■□□□□ 0.35
MBD1-209ENST00000398495 TECP42680 631 aa17.24■□□□□ 0.35
MBD1-209ENST00000398495 CUL5Q93034 780 aa17.24■□□□□ 0.35
MBD1-209ENST00000398495 MTMR9Q96QG7 549 aa17.24■□□□□ 0.35
MBD1-209ENST00000398495 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
MBD1-209ENST00000398495 GOLGA8FQ08AF8 430 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 GOLGA8DPQ0D2H9 430 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 CDC37Q16543 378 aaPredicted RBP17.23■□□□□ 0.35
MBD1-209ENST00000398495 CDKAL1Q5VV42 579 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 C16orf45Q96MC5 204 aaPredicted RBP17.23■□□□□ 0.35
MBD1-209ENST00000398495 MMTAG2Q9BU76 263 aaKnown RBP17.23■□□□□ 0.35
MBD1-209ENST00000398495 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
MBD1-209ENST00000398495 GDAQ9Y2T3 454 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 NDUFB10O96000 172 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 TXKP42681 527 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 CALCRLQ16602 461 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 TPD52L1Q16890 204 aaPredicted RBP17.23■□□□□ 0.35
MBD1-209ENST00000398495 ZNF658Q5TYW1 1059 aaPredicted RBP17.23■□□□□ 0.35
MBD1-209ENST00000398495 APTXQ7Z2E3 356 aaKnown RBP17.23■□□□□ 0.35
MBD1-209ENST00000398495 KBTBD4Q9NVX7 518 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 RMND1Q9NWS8 449 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 TMOD2Q9NZR1 351 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 CNTNAP1P78357 1384 aa17.23■□□□□ 0.35
MBD1-209ENST00000398495 KLRC4O43908 158 aa17.22■□□□□ 0.35
MBD1-209ENST00000398495 SNAP25P60880 206 aa17.22■□□□□ 0.35
MBD1-209ENST00000398495 RBM26Q5T8P6 1007 aaKnown RBP17.22■□□□□ 0.35
MBD1-209ENST00000398495 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
MBD1-209ENST00000398495 GMCL1P1Q8NEA9 526 aa17.22■□□□□ 0.35
MBD1-209ENST00000398495 F5H6K3 240 aa17.22■□□□□ 0.35
MBD1-209ENST00000398495 KLRC3Q07444 240 aa17.22■□□□□ 0.35
MBD1-209ENST00000398495 DLGAP5Q15398 846 aa17.22■□□□□ 0.35
MBD1-209ENST00000398495 PSTPIP2Q9H939 334 aa17.22■□□□□ 0.35
MBD1-209ENST00000398495 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.35
MBD1-209ENST00000398495 MRPL12P52815 198 aaKnown RBP17.21■□□□□ 0.35
MBD1-209ENST00000398495 TBX2Q13207 712 aaPredicted RBP17.21■□□□□ 0.35
MBD1-209ENST00000398495 KMT5BQ4FZB7 885 aa17.21■□□□□ 0.35
MBD1-209ENST00000398495 GMCL1Q96IK5 515 aa17.21■□□□□ 0.35
MBD1-209ENST00000398495 PRIMPOLQ96LW4 560 aa17.21■□□□□ 0.35
MBD1-209ENST00000398495 CUEDC2Q9H467 287 aa17.21■□□□□ 0.35
MBD1-209ENST00000398495 RWDD2AQ9UIY3 292 aa17.21■□□□□ 0.35
MBD1-209ENST00000398495 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
MBD1-209ENST00000398495 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
MBD1-209ENST00000398495 A0A1B0GTH6 734 aa17.21■□□□□ 0.34
MBD1-209ENST00000398495 A0A1W2PRG0 241 aa17.21■□□□□ 0.34
MBD1-209ENST00000398495 FXR2P51116 673 aaKnown RBP eCLIP17.21■□□□□ 0.34
MBD1-209ENST00000398495 PAK1Q13153 545 aa17.21■□□□□ 0.34
MBD1-209ENST00000398495 DHX8Q14562 1220 aaKnown RBP17.21■□□□□ 0.34
MBD1-209ENST00000398495 CCAR2Q8N163 923 aaKnown RBP17.21■□□□□ 0.34
MBD1-209ENST00000398495 FBXO41Q8TF61 875 aa17.21■□□□□ 0.34
MBD1-209ENST00000398495 SLC16A10Q8TF71 515 aa17.21■□□□□ 0.34
MBD1-209ENST00000398495 NELFBQ8WX92 580 aa17.21■□□□□ 0.34
MBD1-209ENST00000398495 TRMT1Q9NXH9 659 aaKnown RBP17.21■□□□□ 0.34
MBD1-209ENST00000398495 USP17L15C9J2P7 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L13C9JLJ4 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L11C9JVI0 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L18D6R9N7 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L22D6RA61 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L17D6RBQ6 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L19D6RCP7 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L20D6RJB6 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 PRCPP42785 496 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L24Q0WX57 530 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 NR1I3Q14994 352 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 USP17L6PQ6QN14 398 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 CDAN1Q8IWY9 1227 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 MYRIPQ8NFW9 859 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 FAM151AQ8WW52 585 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 MAGEF1Q9HAY2 307 aa17.2■□□□□ 0.34
MBD1-209ENST00000398495 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms