RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 BRF1Q92994 677 aa29.63■■■□□ 2.33
U2AF1-203ENST00000398137 RAVER2Q9HCJ3 691 aaKnown RBP29.63■■■□□ 2.33
U2AF1-203ENST00000398137 PDRG1Q9NUG6 133 aa29.63■■■□□ 2.33
U2AF1-203ENST00000398137 SEPT4O43236 478 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 COPB2P35606 906 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 STAT2P52630 851 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 KCTD2Q14681 263 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 TTBK2Q6IQ55 1244 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 CPXCR1Q8N123 301 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 NUP133Q8WUM0 1156 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 TBC1D32Q96NH3 1257 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 ZMYND8Q9ULU4 1186 aaPredicted RBP29.62■■■□□ 2.33
U2AF1-203ENST00000398137 DIS3Q9Y2L1 958 aaKnown RBP29.62■■■□□ 2.33
U2AF1-203ENST00000398137 SLC12A7Q9Y666 1083 aa29.62■■■□□ 2.33
U2AF1-203ENST00000398137 DNAJC25-GNG10A0A024R161 153 aa29.61■■■□□ 2.33
U2AF1-203ENST00000398137 DDAH1O94760 285 aa29.61■■■□□ 2.33
U2AF1-203ENST00000398137 PARP1P09874 1014 aaKnown RBP29.61■■■□□ 2.33
U2AF1-203ENST00000398137 TROAPQ12815 778 aa29.61■■■□□ 2.33
U2AF1-203ENST00000398137 KIF2CQ99661 725 aa29.61■■■□□ 2.33
U2AF1-203ENST00000398137 BRPF3Q9ULD4 1205 aa29.61■■■□□ 2.33
U2AF1-203ENST00000398137 LAMA3Q16787 3333 aa29.61■■■□□ 2.33
U2AF1-203ENST00000398137 TAL1P17542 331 aaPredicted RBP29.6■■■□□ 2.33
U2AF1-203ENST00000398137 RXRAP19793 462 aa29.6■■■□□ 2.33
U2AF1-203ENST00000398137 SLC16A2P36021 539 aa29.6■■■□□ 2.33
U2AF1-203ENST00000398137 APOBRQ0VD83 1088 aa29.6■■■□□ 2.33
U2AF1-203ENST00000398137 GRM4Q14833 912 aa29.6■■■□□ 2.33
U2AF1-203ENST00000398137 ASPRV1Q53RT3 343 aa29.6■■■□□ 2.33
U2AF1-203ENST00000398137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.6■■■□□ 2.33
U2AF1-203ENST00000398137 FAM160B2Q86V87 743 aa29.6■■■□□ 2.33
U2AF1-203ENST00000398137 TINF2Q9BSI4 451 aa29.6■■■□□ 2.33
U2AF1-203ENST00000398137 KLF18A0A0U1RQI7 1052 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 DNM1LO00429 736 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 ZBED4O75132 1171 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 SYN1P17600 705 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 TOB2Q14106 344 aaPredicted RBP29.59■■■□□ 2.33
U2AF1-203ENST00000398137 GPATCH4Q5T3I0 446 aaKnown RBP29.59■■■□□ 2.33
U2AF1-203ENST00000398137 APOA5Q6Q788 366 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 MICU3Q86XE3 530 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 CHURC1Q8WUH1 139 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 GDF15Q99988 308 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 AGXT2Q9BYV1 514 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 NAP1L2Q9ULW6 460 aaPredicted RBP29.59■■■□□ 2.33
U2AF1-203ENST00000398137 ZNF536O15090 1300 aa29.59■■■□□ 2.33
U2AF1-203ENST00000398137 GJC2Q5T442 439 aaPredicted RBP29.58■■■□□ 2.33
U2AF1-203ENST00000398137 STAG2Q8N3U4 1231 aa29.58■■■□□ 2.33
U2AF1-203ENST00000398137 FBXL16Q8N461 479 aa29.58■■■□□ 2.33
U2AF1-203ENST00000398137 FGD4Q96M96 766 aa29.58■■■□□ 2.33
U2AF1-203ENST00000398137 SENP6Q9GZR1 1112 aaPredicted RBP29.58■■■□□ 2.33
U2AF1-203ENST00000398137 CPVLQ9H3G5 476 aa29.58■■■□□ 2.33
U2AF1-203ENST00000398137 PLA2G6O60733 806 aa29.57■■■□□ 2.32
U2AF1-203ENST00000398137 ZNF865P0CJ78 1059 aaPredicted RBP29.57■■■□□ 2.32
U2AF1-203ENST00000398137 NEK4P51957 841 aa29.57■■■□□ 2.32
U2AF1-203ENST00000398137 SYDE2Q5VT97 1194 aa29.57■■■□□ 2.32
U2AF1-203ENST00000398137 SYNE3Q6ZMZ3 975 aa29.57■■■□□ 2.32
U2AF1-203ENST00000398137 CCDC144CPQ8IYA2 1237 aa29.57■■■□□ 2.32
U2AF1-203ENST00000398137 MAD2L2Q9UI95 211 aa29.57■■■□□ 2.32
U2AF1-203ENST00000398137 MCM3APO60318 1980 aa29.56■■■□□ 2.32
U2AF1-203ENST00000398137 GOLGA8BA8MQT2 603 aa29.56■■■□□ 2.32
U2AF1-203ENST00000398137 SLC4A3P48751 1232 aa29.56■■■□□ 2.32
U2AF1-203ENST00000398137 OAZ1P54368 228 aa29.56■■■□□ 2.32
U2AF1-203ENST00000398137 BTNL9Q6UXG8 535 aa29.56■■■□□ 2.32
U2AF1-203ENST00000398137 CTCFLQ8NI51 663 aaPredicted RBP29.56■■■□□ 2.32
U2AF1-203ENST00000398137 LARP6Q9BRS8 491 aaKnown RBP29.56■■■□□ 2.32
U2AF1-203ENST00000398137 NRBP1Q9UHY1 535 aa29.56■■■□□ 2.32
U2AF1-203ENST00000398137 PRR12Q9ULL5 1215 aa29.56■■■□□ 2.32
U2AF1-203ENST00000398137 CALM1P0DP23 149 aa29.55■■■□□ 2.32
U2AF1-203ENST00000398137 CALM2P0DP24 149 aa29.55■■■□□ 2.32
U2AF1-203ENST00000398137 CALM3P0DP25 149 aa29.55■■■□□ 2.32
U2AF1-203ENST00000398137 UBA5Q9GZZ9 404 aa29.55■■■□□ 2.32
U2AF1-203ENST00000398137 PALM3A6NDB9 673 aaPredicted RBP29.54■■■□□ 2.32
U2AF1-203ENST00000398137 KLRF2D3W0D1 207 aa29.54■■■□□ 2.32
U2AF1-203ENST00000398137 ZBTB43O43298 467 aa29.54■■■□□ 2.32
U2AF1-203ENST00000398137 SNAI1O95863 264 aaPredicted RBP29.54■■■□□ 2.32
U2AF1-203ENST00000398137 SNAP25P60880 206 aa29.54■■■□□ 2.32
U2AF1-203ENST00000398137 MAMDC4Q6UXC1 1216 aa29.54■■■□□ 2.32
U2AF1-203ENST00000398137 GOLGA8AA7E2F4 631 aa29.53■■■□□ 2.32
U2AF1-203ENST00000398137 KIF5BP33176 963 aa29.53■■■□□ 2.32
U2AF1-203ENST00000398137 AK2P54819 239 aa29.53■■■□□ 2.32
U2AF1-203ENST00000398137 LRRC41Q15345 812 aa29.53■■■□□ 2.32
U2AF1-203ENST00000398137 LENG1Q96BZ8 264 aaPredicted RBP29.53■■■□□ 2.32
U2AF1-203ENST00000398137 AGBL1Q96MI9 1066 aa29.53■■■□□ 2.32
U2AF1-203ENST00000398137 MAP3K14Q99558 947 aa29.53■■■□□ 2.32
U2AF1-203ENST00000398137 CTDP1Q9Y5B0 961 aaPredicted RBP29.53■■■□□ 2.32
U2AF1-203ENST00000398137 BMP8BP34820 402 aa29.52■■■□□ 2.32
U2AF1-203ENST00000398137 MAGEA10P43363 369 aaPredicted RBP29.52■■■□□ 2.32
U2AF1-203ENST00000398137 ATN1P54259 1190 aaPredicted RBP29.52■■■□□ 2.32
U2AF1-203ENST00000398137 NOL8Q76FK4 1167 aaKnown RBP29.52■■■□□ 2.32
U2AF1-203ENST00000398137 ARRDC4Q8NCT1 418 aa29.52■■■□□ 2.32
U2AF1-203ENST00000398137 CHST13Q8NET6 341 aa29.52■■■□□ 2.32
U2AF1-203ENST00000398137 DDX11Q96FC9 970 aa29.52■■■□□ 2.32
U2AF1-203ENST00000398137 DHX16O60231 1041 aaKnown RBP29.51■■■□□ 2.31
U2AF1-203ENST00000398137 FDX1P10109 184 aa29.51■■■□□ 2.31
U2AF1-203ENST00000398137 RABEP1Q15276 862 aa29.51■■■□□ 2.31
U2AF1-203ENST00000398137 MSL3Q8N5Y2 521 aaKnown RBP29.51■■■□□ 2.31
U2AF1-203ENST00000398137 FANCBQ8NB91 859 aa29.51■■■□□ 2.31
U2AF1-203ENST00000398137 ALDH8A1Q9H2A2 487 aaPredicted RBP29.51■■■□□ 2.31
U2AF1-203ENST00000398137 HOMER2Q9NSB8 354 aa29.51■■■□□ 2.31
U2AF1-203ENST00000398137 LCTP09848 1927 aa29.51■■■□□ 2.31
U2AF1-203ENST00000398137 SYNGAP1Q96PV0 1343 aa29.5■■■□□ 2.31
U2AF1-203ENST00000398137 A0A1W2PPC1 479 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms