RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 RPS8P62241 208 aaKnown RBP5.61□□□□□ -1.51
SSR1-202ENST00000397511 FUT2Q10981 343 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 NFIXQ14938 502 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 NPY5RQ15761 445 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 AMOTL1Q8IY63 956 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 ZNF652Q9Y2D9 606 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 LRP6O75581 1613 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 PAPPAQ13219 1627 aa5.61□□□□□ -1.51
SSR1-202ENST00000397511 FAM170AA1A519 330 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 PPP1R3GB7ZBB8 358 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 F8W031 263 aaPredicted RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 NKRFO15226 690 aaKnown RBP eCLIP5.6□□□□□ -1.51
SSR1-202ENST00000397511 PRPF3O43395 683 aaKnown RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 STX10O60499 249 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SHOX2O60902 331 aaPredicted RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 GYPCP04921 128 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 CCDC175P0C221 793 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SCG2P13521 617 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 STAT6P42226 847 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 AARSP49588 968 aaKnown RBP eCLIP5.6□□□□□ -1.51
SSR1-202ENST00000397511 MRPL12P52815 198 aaKnown RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 PMS1P54277 932 aaKnown RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 UBXN1Q04323 297 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 KIF4BQ2VIQ3 1234 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 TMTC3Q6ZXV5 915 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 OTUD6BQ8N6M0 293 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 ITFG2Q969R8 447 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 PCMTD1Q96MG8 357 aaPredicted RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 C8orf37Q96NL8 207 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 NLRP3Q96P20 1036 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 PNKPQ96T60 521 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SETDB2Q96T68 719 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 CHP1Q99653 195 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SH3GL3Q99963 347 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 KAT14Q9H8E8 782 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SPATS2LQ9NUQ6 558 aaKnown RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 GUCA1BQ9UMX6 200 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 RTL9Q8NET4 1388 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 MYH8P13535 1937 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 ATXN2Q99700 1313 aaKnown RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 FAM237AA0A1B0GTK4 181 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 TSPY3P0CV98 308 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 TSPY8P0CW00 308 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SLURP2P0DP57 97 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 PRCPP42785 496 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 TBX2Q13207 712 aaPredicted RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 KRT31Q15323 416 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 LETM2Q2VYF4 491 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 FILIP1LQ4L180 1135 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SPATA1Q5VX52 437 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 B4GALNT4Q76KP1 1039 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SPATS2Q86XZ4 545 aaKnown RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 CLEC10AQ8IUN9 316 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 PNMA1Q8ND90 353 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 FAM76AQ8TAV0 307 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 SH3RF3Q8TEJ3 882 aaPredicted RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 NELFBQ8WX92 580 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 GJA10Q969M2 543 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 CRNKL1Q9BZJ0 848 aaKnown RBP5.6□□□□□ -1.51
SSR1-202ENST00000397511 TMEM60Q9H2L4 133 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 IL17RBQ9NRM6 502 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 CDC23Q9UJX2 597 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 CNTNAP5Q8WYK1 1306 aa5.6□□□□□ -1.51
SSR1-202ENST00000397511 A0A1B0GTH6 734 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 CCDC194A0A1B0GVG4 234 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 TTC36A6NLP5 189 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 ZPR1O75312 459 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 FSBPO95073 299 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 KRT9P35527 623 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 ARHGAP25P42331 645 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 KLK7P49862 253 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 CLNS1AP54105 237 aaKnown RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 MRPS25P82663 173 aaKnown RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 KCTD19Q17RG1 926 aaPredicted RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 FKBP15Q5T1M5 1219 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 NT5DC1Q5TFE4 455 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 KANK3Q6NY19 840 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 SLC35F6Q8N357 371 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 ARMC2Q8NEN0 867 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 BCAS4Q8TDM0 211 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 FAM210AQ96ND0 272 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 UBA5Q9GZZ9 404 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 CD248Q9HCU0 757 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 ETAA1Q9NY74 926 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 ADD3Q9UEY8 706 aaKnown RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 ANKRD33BA6NCL7 494 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 LRRIQ3A6PVS8 624 aaPredicted RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 KCNJ18B7U540 433 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 SRGAP2O75044 1071 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 ZMYND10O75800 440 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 PRPF6O94906 941 aaKnown RBP5.59□□□□□ -1.51
SSR1-202ENST00000397511 MCM3P25205 808 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 CDR1P51861 262 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 VSNL1P62760 191 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 ADCY2Q08462 1091 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 PICALMQ13492 652 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 UBE4AQ14139 1066 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 KCNJ12Q14500 433 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 WLSQ5T9L3 541 aa5.59□□□□□ -1.51
SSR1-202ENST00000397511 NCAPH2Q6IBW4 605 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms