RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MKL1Q969V6 931 aa10.47□□□□□ -0.73
CAPN3-208ENST00000397204 RNPC3Q96LT9 517 aaKnown RBP10.47□□□□□ -0.73
CAPN3-208ENST00000397204 LRRCC1Q9C099 1032 aa10.47□□□□□ -0.73
CAPN3-208ENST00000397204 ZNF287Q9HBT7 754 aa10.47□□□□□ -0.73
CAPN3-208ENST00000397204 STARD7Q9NQZ5 370 aa10.47□□□□□ -0.73
CAPN3-208ENST00000397204 COG6Q9Y2V7 657 aa10.47□□□□□ -0.73
CAPN3-208ENST00000397204 ELP1O95163 1332 aa10.47□□□□□ -0.73
CAPN3-208ENST00000397204 ROBO3Q96MS0 1386 aa10.47□□□□□ -0.73
CAPN3-208ENST00000397204 SPTBN5Q9NRC6 3674 aaKnown RBP10.46□□□□□ -0.73
CAPN3-208ENST00000397204 GSG1L2A8MUP6 293 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 TIMP1P01033 207 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 CHGBP05060 677 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 FDX1P10109 184 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 CDK7P50613 346 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 EPHB4P54760 987 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 ACVR2BQ13705 512 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 CCDC174Q6PII3 467 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 PACS2Q86VP3 889 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 ZNF444Q8N0Y2 327 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-208ENST00000397204 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
CAPN3-208ENST00000397204 WNT2BQ93097 391 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 ABHD16BQ9H3Z7 469 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 SPC25Q9HBM1 224 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 ECHDC1Q9NTX5 307 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 CLIP2Q9UDT6 1046 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 FBXO40Q9UH90 709 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 SYNPO2Q9UMS6 1093 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 RIPK3Q9Y572 518 aa10.46□□□□□ -0.73
CAPN3-208ENST00000397204 CTDP1Q9Y5B0 961 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-208ENST00000397204 MROH7Q68CQ1 1323 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 SYNRGQ9UMZ2 1314 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 MINDY4BA8MYZ0 360 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 NDUFB10O96000 172 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 ZFYP08048 801 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-208ENST00000397204 FOSL2P15408 326 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 GNAT2P19087 354 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 CST5P28325 142 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-208ENST00000397204 SMYD5Q6GMV2 418 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 MFSD5Q6N075 450 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 ANKRD35Q8N283 1001 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 KBTBD3Q8NAB2 608 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 CHST13Q8NET6 341 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 GLT1D1Q96MS3 346 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 NUP88Q99567 741 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-208ENST00000397204 SLC38A10Q9HBR0 1119 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 FEM1BQ9UK73 627 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 MUC3AQ02505 3323 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 NCOR1O75376 2440 aa10.45□□□□□ -0.74
CAPN3-208ENST00000397204 IGKV6D-41A0A0C4DH26 115 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 RNF113AO15541 343 aaKnown RBP10.44□□□□□ -0.74
CAPN3-208ENST00000397204 ASGR1P07306 291 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 SLC4A3P48751 1232 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 OAZ1P54368 228 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 GJA9P57773 515 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 PTGDRQ13258 359 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 PPIGQ13427 754 aaKnown RBP eCLIP10.44□□□□□ -0.74
CAPN3-208ENST00000397204 LRRFIP1Q32MZ4 808 aaKnown RBP10.44□□□□□ -0.74
CAPN3-208ENST00000397204 CCDC144BQ3MJ40 725 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 PADI6Q6TGC4 694 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 LAPTM4BQ86VI4 370 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 CPXCR1Q8N123 301 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 OSBP2Q969R2 916 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 VTI1AQ96AJ9 217 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 UPF3AQ9H1J1 476 aaKnown RBP10.44□□□□□ -0.74
CAPN3-208ENST00000397204 RAVER2Q9HCJ3 691 aaKnown RBP10.44□□□□□ -0.74
CAPN3-208ENST00000397204 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-208ENST00000397204 MTMR4Q9NYA4 1195 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 ZHX1Q9UKY1 873 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-208ENST00000397204 TBX21Q9UL17 535 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 ZNFX1Q9P2E3 1918 aaKnown RBP10.44□□□□□ -0.74
CAPN3-208ENST00000397204 FRMPD3Q5JV73 1810 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 A0A0G2JMZ2 1700 aa10.44□□□□□ -0.74
CAPN3-208ENST00000397204 PATL2C9JE40 543 aaKnown RBP10.43□□□□□ -0.74
CAPN3-208ENST00000397204 ARVCFO00192 962 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 SMAPO00193 183 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 TTLL1O95922 423 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 C6orf222P0C671 652 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-208ENST00000397204 DNAJB2P25686 324 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 NKX3-2P78367 333 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 GRIN2CQ14957 1233 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 GNASQ5JWF2 1037 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 C16orf59Q7L2K0 433 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 TMEM199Q8N511 208 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 GMCL1P1Q8NEA9 526 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 CHURC1Q8WUH1 139 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 APPBP2Q92624 585 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 LENG1Q96BZ8 264 aaPredicted RBP10.43□□□□□ -0.74
CAPN3-208ENST00000397204 GPATCH3Q96I76 525 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
CAPN3-208ENST00000397204 SEZ6LQ9BYH1 1024 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 ZNF576Q9H609 170 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 HCSTQ9UBK5 93 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 CHD9Q3L8U1 2897 aa10.43□□□□□ -0.74
CAPN3-208ENST00000397204 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 BDP1A6H8Y1 2624 aa10.42□□□□□ -0.74
CAPN3-208ENST00000397204 A0A0U1RQG5 324 aaPredicted RBP10.42□□□□□ -0.74
CAPN3-208ENST00000397204 TLR3O15455 904 aaKnown RBP10.42□□□□□ -0.74
CAPN3-208ENST00000397204 SMARCA5O60264 1052 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms