RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CEP57Q86XR8 500 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 ANKRD18AQ8IVF6 992 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 PLIN2Q99541 437 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 EXOC1Q9NV70 894 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 ABCF2Q9UG63 623 aa10.22□□□□□ -0.77
CAPN3-206ENST00000397163 IQSEC3Q9UPP2 1182 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-206ENST00000397163 MYO5AQ9Y4I1 1855 aaKnown RBP10.22□□□□□ -0.77
CAPN3-206ENST00000397163 PDS5AQ29RF7 1337 aaKnown RBP10.21□□□□□ -0.77
CAPN3-206ENST00000397163 ZEB2O60315 1214 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 ELF1P32519 619 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 KLK7P49862 253 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 ATP1A2P50993 1020 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 PDCLQ13371 301 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 NPY5RQ15761 445 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 MEA1Q16626 185 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 CCDC170Q8IYT3 715 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 PRPF38AQ8NAV1 312 aaKnown RBP10.21□□□□□ -0.77
CAPN3-206ENST00000397163 AENQ8WTP8 325 aaKnown RBP10.21□□□□□ -0.77
CAPN3-206ENST00000397163 RRP36Q96EU6 259 aaKnown RBP10.21□□□□□ -0.77
CAPN3-206ENST00000397163 TUBGCP2Q9BSJ2 902 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 THAP9Q9H5L6 903 aa10.21□□□□□ -0.77
CAPN3-206ENST00000397163 CYP2D7A0A087X1C5 515 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 GOLGA8KD6RF30 607 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 OPA1O60313 960 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 TACC1O75410 805 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 SRGNP10124 158 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 TRAPPC10P48553 1259 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 RNF187Q5TA31 235 aaPredicted RBP10.21□□□□□ -0.78
CAPN3-206ENST00000397163 ZNF662Q6ZS27 426 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 TMTC3Q6ZXV5 915 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 CSGALNACT2Q8N6G5 542 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 SMCR8Q8TEV9 937 aaPredicted RBP10.21□□□□□ -0.78
CAPN3-206ENST00000397163 HDAC7Q8WUI4 952 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 ZKSCAN4Q969J2 545 aaPredicted RBP10.21□□□□□ -0.78
CAPN3-206ENST00000397163 CABS1Q96KC9 395 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 CCDC42Q96M95 316 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 PSMB7Q99436 277 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 LRRC1Q9BTT6 524 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 NUP58Q9BVL2 599 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 PRDM11Q9NQV5 511 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 LRWD1Q9UFC0 647 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 ASAP1Q9ULH1 1129 aa10.21□□□□□ -0.78
CAPN3-206ENST00000397163 MAGEB6P1A0A0J9YX57 407 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 NUTM2BA6NNL0 878 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 NUTM2EB1AL46 878 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 EIF3HO15372 352 aaKnown RBP eCLIP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 USO1O60763 962 aaKnown RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 CALM1P0DP23 149 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 CALM2P0DP24 149 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 CALM3P0DP25 149 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 LONP1P36776 959 aaKnown RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 MTIF2P46199 727 aaKnown RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 VAV2P52735 878 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 ZBED6P86452 979 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 SLC7A5Q01650 507 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 TROAPQ12815 778 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 CCDC181Q5TID7 509 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 FNBP4Q8N3X1 1017 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 DMGDHQ9UI17 866 aaKnown RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 SNX12Q9UMY4 172 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 SPATA31A6Q5VVP1 1343 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 NF2P35240 595 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 NKX1-1Q15270 411 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 KCTD16Q68DU8 428 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 KRT26Q7Z3Y9 468 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 TSGA10Q9BZW7 698 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 DISC1Q9NRI5 854 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 NDUFAB1O14561 156 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 SCG2P13521 617 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 IL2RBP14784 551 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 E2F5Q15329 346 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 FAM43BQ6ZT52 329 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 CREG2Q8IUH2 290 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 MMGT1Q8N4V1 131 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 SRBD1Q8N5C6 995 aaKnown RBP10.2□□□□□ -0.78
CAPN3-206ENST00000397163 OTUD6BQ8N6M0 293 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 TRIM58Q8NG06 486 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 MIEF2Q96C03 454 aa10.2□□□□□ -0.78
CAPN3-206ENST00000397163 COL18A1P39060 1754 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 PP2D1A8MPX8 630 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 HSF2BPO75031 334 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 KIAA0754O94854 1291 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 UBA7P41226 1012 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 DTHD1Q6ZMT9 781 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 SH2D3CQ8N5H7 860 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 RETREG2Q8NC44 543 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 SPATA4Q8NEY3 305 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 MLXIPQ9HAP2 919 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 GRIN2DO15399 1336 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 CNTNAP5Q8WYK1 1306 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 CXCR5P32302 372 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 ARL6IP4Q66PJ3 421 aaKnown RBP10.19□□□□□ -0.78
CAPN3-206ENST00000397163 TTI2Q6NXR4 508 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 ADGRA1Q86SQ6 560 aa10.19□□□□□ -0.78
CAPN3-206ENST00000397163 ZNF526Q8TF50 670 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-206ENST00000397163 NOC3LQ8WTT2 800 aaKnown RBP10.19□□□□□ -0.78
CAPN3-206ENST00000397163 CNOT6LQ96LI5 555 aaKnown RBP10.19□□□□□ -0.78
CAPN3-206ENST00000397163 NOC4LQ9BVI4 516 aaKnown RBP10.19□□□□□ -0.78
CAPN3-206ENST00000397163 IFIH1Q9BYX4 1025 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms