RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SPC25Q9HBM1 224 aa16.29■□□□□ 0.2
SEC13-204ENST00000397099 XPNPEP3Q9NQH7 507 aa16.29■□□□□ 0.2
SEC13-204ENST00000397099 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.29■□□□□ 0.2
SEC13-204ENST00000397099 MYH6P13533 1939 aa16.29■□□□□ 0.2
SEC13-204ENST00000397099 E7EWF7 191 aa16.28■□□□□ 0.2
SEC13-204ENST00000397099 DUSP11O75319 330 aaKnown RBP16.28■□□□□ 0.2
SEC13-204ENST00000397099 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
SEC13-204ENST00000397099 BMP8BP34820 402 aa16.28■□□□□ 0.2
SEC13-204ENST00000397099 SEC23AQ15436 765 aa16.28■□□□□ 0.2
SEC13-204ENST00000397099 ARMCX2Q7L311 632 aa16.28■□□□□ 0.2
SEC13-204ENST00000397099 UBE2OQ9C0C9 1292 aaKnown RBP16.28■□□□□ 0.2
SEC13-204ENST00000397099 RBM8AQ9Y5S9 174 aaKnown RBP16.28■□□□□ 0.2
SEC13-204ENST00000397099 MCM3APO60318 1980 aa16.27■□□□□ 0.2
SEC13-204ENST00000397099 IFIT3O14879 490 aaKnown RBP16.27■□□□□ 0.2
SEC13-204ENST00000397099 LRRC41Q15345 812 aa16.27■□□□□ 0.2
SEC13-204ENST00000397099 RNF20Q5VTR2 975 aa16.27■□□□□ 0.2
SEC13-204ENST00000397099 RASGRP2Q7LDG7 609 aa16.27■□□□□ 0.2
SEC13-204ENST00000397099 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
SEC13-204ENST00000397099 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
SEC13-204ENST00000397099 LBHD1Q9BQE6 289 aaPredicted RBP16.27■□□□□ 0.2
SEC13-204ENST00000397099 PRKAG2Q9UGJ0 569 aa16.27■□□□□ 0.2
SEC13-204ENST00000397099 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.2
SEC13-204ENST00000397099 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
SEC13-204ENST00000397099 ABCB11O95342 1321 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 RTP1P59025 263 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 MDM2Q00987 491 aaPredicted RBP16.26■□□□□ 0.19
SEC13-204ENST00000397099 WTAPQ15007 396 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 MUM1L1Q5H9M0 696 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 C1orf53Q5VUE5 145 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 NSMFQ6X4W1 530 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 MCF2L2Q86YR7 1114 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 DNERQ8NFT8 737 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 NUP133Q8WUM0 1156 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 FGD4Q96M96 766 aa16.26■□□□□ 0.19
SEC13-204ENST00000397099 MOXD2PA6NHM9 499 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 GOLGA8HP0CJ92 632 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 TAL1P17542 331 aaPredicted RBP16.25■□□□□ 0.19
SEC13-204ENST00000397099 ADCYAP1R1P41586 468 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 SNAP25P60880 206 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 CNTN2Q02246 1040 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 RNF207Q6ZRF8 634 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 CATIPQ7Z7H3 387 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 ADGRF4Q8IZF3 695 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 PCSK9Q8NBP7 692 aaKnown RBP16.25■□□□□ 0.19
SEC13-204ENST00000397099 MORC4Q8TE76 937 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 FERMT2Q96AC1 680 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 LRCH3Q96II8 777 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 MAP3K14Q99558 947 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 LSG1Q9H089 658 aaKnown RBP16.25■□□□□ 0.19
SEC13-204ENST00000397099 VTA1Q9NP79 307 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 PHF24Q9UPV7 400 aa16.25■□□□□ 0.19
SEC13-204ENST00000397099 PTPDC1A2A3K4 754 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 SOWAHBA6NEL2 793 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 KLRF2D3W0D1 207 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 SOX1O00570 391 aaPredicted RBP16.24■□□□□ 0.19
SEC13-204ENST00000397099 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
SEC13-204ENST00000397099 CDC45O75419 566 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 PGK1P00558 417 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 CST5P28325 142 aaPredicted RBP16.24■□□□□ 0.19
SEC13-204ENST00000397099 MCM5P33992 734 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 NKX3-2P78367 333 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 CDC37Q16543 378 aaPredicted RBP16.24■□□□□ 0.19
SEC13-204ENST00000397099 CCDC144BQ3MJ40 725 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 IQSEC1Q6DN90 963 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 SLC39A5Q6ZMH5 540 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 TDHQ8IZJ6 230 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 ANO2Q9NQ90 1003 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 MAP3K20Q9NYL2 800 aaKnown RBP16.24■□□□□ 0.19
SEC13-204ENST00000397099 MRPL11Q9Y3B7 192 aaKnown RBP16.24■□□□□ 0.19
SEC13-204ENST00000397099 Q9Y3F1 56 aa16.24■□□□□ 0.19
SEC13-204ENST00000397099 SZT2Q5T011 3432 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 GJA9P57773 515 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 BAATQ14032 418 aaPredicted RBP16.23■□□□□ 0.19
SEC13-204ENST00000397099 SNX17Q15036 470 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 NECTIN1Q15223 517 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 TMEM67Q5HYA8 995 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 FBXO11Q86XK2 927 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 MB21D2Q8IYB1 491 aaPredicted RBP16.23■□□□□ 0.19
SEC13-204ENST00000397099 CLEC4DQ8WXI8 215 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 SEZ6LQ9BYH1 1024 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 UBA5Q9GZZ9 404 aa16.23■□□□□ 0.19
SEC13-204ENST00000397099 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
SEC13-204ENST00000397099 PRDM5Q9NQX1 630 aaPredicted RBP16.23■□□□□ 0.19
SEC13-204ENST00000397099 SYNRGQ9UMZ2 1314 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 LCTP09848 1927 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 PALM3A6NDB9 673 aaPredicted RBP16.22■□□□□ 0.19
SEC13-204ENST00000397099 NFIBO00712 420 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 ADAMTS4O75173 837 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 KIF5BP33176 963 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 ALDH5A1P51649 535 aaPredicted RBP16.22■□□□□ 0.19
SEC13-204ENST00000397099 TNFAIP2Q03169 654 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 GRM4Q14833 912 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 TRIM60Q495X7 471 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 KLHDC9Q8NEP7 349 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 IGDCC4Q8TDY8 1250 aa16.22■□□□□ 0.19
SEC13-204ENST00000397099 LENG1Q96BZ8 264 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms