RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CYTH3O43739 400 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 ECE2O60344 883 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 GCFC2P16383 781 aaKnown RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 CIITAP33076 1130 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 PLCD1P51178 756 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 GSDMDP57764 484 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 NLRP12P59046 1061 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 ZNF543Q08ER8 600 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 PDIA5Q14554 519 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 NOL9Q5SY16 702 aaKnown RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 TMEM179Q6ZVK1 233 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 KRT25Q7Z3Z0 450 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 ZC3H3Q8IXZ2 948 aaKnown RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 MIGA1Q8NAN2 632 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 FAM151AQ8WW52 585 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 PPP1R13BQ96KQ4 1090 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 MTMR9Q96QG7 549 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 MYCBPQ99417 103 aaPredicted RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 DNAJC18Q9H819 358 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 RIC8AQ9NPQ8 531 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 TRMT1Q9NXH9 659 aaKnown RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 RABGAP1Q9Y3P9 1069 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 CLIC4Q9Y696 253 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 ATP8B3O60423 1300 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 PHLPP2Q6ZVD8 1323 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 LRRC10BA6NIK2 292 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 YDJCA8MPS7 323 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 NR1I2O75469 434 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 TADA3O75528 432 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 RPS6KA5O75582 802 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 FDX1P10109 184 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 RFX1P22670 979 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 OAS2P29728 719 aaKnown RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 GUCY1A2P33402 732 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 TRIM29Q14134 588 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 MORC3Q14149 939 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 SAFBQ15424 915 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS41-203ENST00000395969 SIAH1Q8IUQ4 282 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 TEX11Q8IYF3 940 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 TTLL6Q8N841 843 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 PNMA1Q8ND90 353 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 CTCFLQ8NI51 663 aaPredicted RBP6.06□□□□□ -1.44
VPS41-203ENST00000395969 TCEANC2Q96MN5 208 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 ANO10Q9NW15 660 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 SERPINB13Q9UIV8 391 aa6.06□□□□□ -1.44
VPS41-203ENST00000395969 ANKRD62A6NC57 917 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 TPM1P09493 284 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 USP17L8P0C7I0 530 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 AP3B2Q13367 1082 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 SEPT2Q15019 361 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 ECM1Q16610 540 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 BICDL1Q6ZP65 573 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 SH3BP5LQ7L8J4 393 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 CCAR1Q8IX12 1150 aaKnown RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 DHX40Q8IX18 779 aaKnown RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 DIS3L2Q8IYB7 885 aaKnown RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 IGSF22Q8N9C0 903 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 C12orf42Q96LP6 360 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 SRRTQ9BXP5 876 aaKnown RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 HSD3B7Q9H2F3 369 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 KANSL2Q9H9L4 492 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 DDX4Q9NQI0 724 aaKnown RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 IGSF5Q9NSI5 407 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 MCM9Q9NXL9 1143 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 PNMA6FA0A0J9YX94 578 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 VPS37CA5D8V6 355 aaPredicted RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 EFCAB8A8MWE9 144 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 EDIL3O43854 480 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 PYGBP11216 843 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 ZNF18P17022 549 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 ACTN2P35609 894 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 MAGEA9P43362 315 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 CCT2P78371 535 aaKnown RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 TFAP4Q01664 338 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 EHHADHQ08426 723 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 SMC1AQ14683 1233 aaKnown RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 NCAPHQ15003 741 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 EZH2Q15910 746 aaKnown RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 CC2D1AQ6P1N0 951 aaPredicted RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 PDXDC2PQ6P474 469 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 C11orf57Q6ZUT1 292 aaPredicted RBP6.05□□□□□ -1.44
VPS41-203ENST00000395969 NIPA1Q7RTP0 329 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 GSDMAQ96QA5 445 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 KAT14Q9H8E8 782 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 KCNQ5Q9NR82 932 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 ABCF2Q9UG63 623 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 ZNRF3Q9ULT6 936 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 PCDHA6Q9UN73 950 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 JRKLQ9Y4A0 524 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 PCDHA8Q9Y5H6 950 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 PFASO15067 1338 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 MYPNQ86TC9 1320 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 DOCK5Q9H7D0 1870 aa6.05□□□□□ -1.44
VPS41-203ENST00000395969 CLGNO14967 610 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 PFKFB1P16118 471 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 IBSPP21815 317 aaPredicted RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 USP11P51784 963 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 ENPEPQ07075 957 aa6.04□□□□□ -1.44
VPS41-203ENST00000395969 SKIV2LQ15477 1246 aaKnown RBP6.04□□□□□ -1.44
VPS41-203ENST00000395969 Q4G0T1 1027 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms