RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 CASQ2O14958 399 aaPredicted RBP4.78□□□□□ -1.64
HERC4-204ENST00000395198 P4HA2O15460 535 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 DGKIO75912 1065 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 EPN2O95208 641 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 ZSCAN22P10073 491 aaPredicted RBP4.78□□□□□ -1.64
HERC4-204ENST00000395198 SCG2P13521 617 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 CHKAP35790 457 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 NR2C2P49116 596 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 ALDH5A1P51649 535 aaPredicted RBP4.78□□□□□ -1.64
HERC4-204ENST00000395198 CLCN2P51788 898 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 AKAP17AQ02040 695 aaKnown RBP4.78□□□□□ -1.64
HERC4-204ENST00000395198 MUM1L1Q5H9M0 696 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 LRRTM3Q86VH5 581 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 OSTM1Q86WC4 334 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 ANKRD7Q92527 254 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 UPF1Q92900 1129 aaKnown RBP eCLIP4.78□□□□□ -1.64
HERC4-204ENST00000395198 DHTKD1Q96HY7 919 aaPredicted RBP4.78□□□□□ -1.64
HERC4-204ENST00000395198 FAXDC2Q96IV6 333 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 RADILQ96JH8 1075 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 GPR108Q9NPR9 543 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 TCP11L1Q9NUJ3 509 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 ABCF3Q9NUQ8 709 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 COG5Q9UP83 839 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 PCDHGB5Q9Y5G0 923 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 CLASP1Q7Z460 1538 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 BIN1O00499 593 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 FRS3O43559 492 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 RPS2P15880 293 aaKnown RBP4.78□□□□□ -1.64
HERC4-204ENST00000395198 TPP2P29144 1249 aaPredicted RBP4.78□□□□□ -1.64
HERC4-204ENST00000395198 HDAC4P56524 1084 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 AP1B1Q10567 949 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 SAFBQ15424 915 aaKnown RBP eCLIP4.78□□□□□ -1.64
HERC4-204ENST00000395198 GPR162Q16538 588 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 METTL11BQ5VVY1 283 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 EFCAB13Q8IY85 973 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 PRKD2Q9BZL6 878 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 TRPV4Q9HBA0 871 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 DISC1Q9NRI5 854 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 KRT82Q9NSB4 513 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 PCDHB8Q9UN66 801 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 PCDHB13Q9Y5F0 798 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 WIZO95785 1651 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 ARPC4-TTLL3A0A0A6YYG9 625 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 PHF20L1A8MW92 1017 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 H0Y626 953 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 SPTLC1O15269 473 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 RTN2O75298 545 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 ATP6V1B1P15313 513 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 ATP6V1E1P36543 226 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 CNGA3Q16281 694 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 MMEL1Q495T6 779 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 C2orf27AQ580R0 203 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 AKAP4Q5JQC9 854 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 METTL24Q5JXM2 366 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 CCDC80Q76M96 950 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 HS2ST1Q7LGA3 356 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 CCDC186Q7Z3E2 898 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 GOLGA5Q8TBA6 731 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 CHAC2Q8WUX2 184 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 RBM17Q96I25 401 aaKnown RBP4.78□□□□□ -1.64
HERC4-204ENST00000395198 TBATAQ96M53 351 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 CRB3Q9BUF7 120 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 RABEP2Q9H5N1 569 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 PDLIM7Q9NR12 457 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 SEPT10Q9P0V9 454 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 ZBTB21Q9ULJ3 1066 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 TONSLQ96HA7 1378 aa4.78□□□□□ -1.64
HERC4-204ENST00000395198 GPR75-ASB3A0A0A6YYF3 556 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 SLC7A4O43246 635 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 RFPL1O75677 317 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 FKBP4Q02790 459 aaKnown RBP eCLIP4.77□□□□□ -1.65
HERC4-204ENST00000395198 RABEP1Q15276 862 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 SWI5Q1ZZU3 235 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 ANKDD1AQ495B1 522 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 NUP54Q7Z3B4 507 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 OR6C4Q8NGE1 309 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 FRAT1Q92837 279 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 MTMR8Q96EF0 704 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CFAP36Q96G28 342 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 NAF1Q96HR8 494 aaKnown RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 WDR24Q96S15 920 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CCDC87Q9NVE4 849 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CTNNA3Q9UI47 895 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 GJD2Q9UKL4 321 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 KIAA1024Q9UPX6 916 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 MTF2Q9Y483 593 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 PTCH2Q9Y6C5 1203 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CCNB3Q8WWL7 1395 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 F5H423 210 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 AKR1B1P15121 316 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 NASPP49321 788 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 RELQ04864 619 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 ANKRD1Q15327 319 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 EPHX4Q8IUS5 362 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 JAKMIP1Q96N16 626 aaKnown RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 TOPORSQ9NS56 1045 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 NKIRAS2Q9NYR9 191 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.77□□□□□ -1.65
HERC4-204ENST00000395198 STK39Q9UEW8 545 aa4.77□□□□□ -1.65
HERC4-204ENST00000395198 RSPH14Q9UHP6 348 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms