RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 CNTNAP5Q8WYK1 1306 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 CSRNP1Q96S65 589 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 USB1Q9BQ65 265 aaKnown RBP7.98□□□□□ -1.13
RTN4-205ENST00000394609 FHDC1Q9C0D6 1143 aaPredicted RBP7.98□□□□□ -1.13
RTN4-205ENST00000394609 RCOR1Q9UKL0 485 aa7.98□□□□□ -1.13
RTN4-205ENST00000394609 R3HCC1Q9Y3T6 440 aaKnown RBP7.98□□□□□ -1.13
RTN4-205ENST00000394609 KIF13BQ9NQT8 1826 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 LAMB1P07942 1786 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 DDX60LQ5H9U9 1706 aaKnown RBP7.97□□□□□ -1.13
RTN4-205ENST00000394609 FRMPD2Q68DX3 1309 aaPredicted RBP7.97□□□□□ -1.13
RTN4-205ENST00000394609 IGKV6D-41A0A0C4DH26 115 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 PALM3A6NDB9 673 aaPredicted RBP7.97□□□□□ -1.13
RTN4-205ENST00000394609 KLRF2D3W0D1 207 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 WNT10BO00744 389 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 CYTH3O43739 400 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 RAD21O60216 631 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 ENTPD3O75355 529 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 PARP1P09874 1014 aaKnown RBP7.97□□□□□ -1.13
RTN4-205ENST00000394609 LIG1P18858 919 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 ME1P48163 572 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 TRIM32Q13049 653 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 TNIP1Q15025 636 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 TAF3Q5VWG9 929 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 ATL3Q6DD88 541 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 ARHGAP27Q6ZUM4 889 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 FOXP4Q8IVH2 680 aaPredicted RBP7.97□□□□□ -1.13
RTN4-205ENST00000394609 NOSTRINQ8IVI9 506 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 MAP3K14Q99558 947 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 TMEM39BQ9GZU3 492 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 UBA5Q9GZZ9 404 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 VAT1LQ9HCJ6 419 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 MYOZ2Q9NPC6 264 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 FAM13BQ9NYF5 915 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 RTEL1Q9NZ71 1219 aa7.97□□□□□ -1.13
RTN4-205ENST00000394609 DXOO77932 396 aaKnown RBP7.96□□□□□ -1.13
RTN4-205ENST00000394609 TTLL1O95922 423 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 SCG2P13521 617 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 XBP1P17861 261 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 ATP2B1P20020 1258 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 NOVP48745 357 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 GMPSP49915 693 aaPredicted RBP7.96□□□□□ -1.13
RTN4-205ENST00000394609 GNAQP50148 359 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 JAG1P78504 1218 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 RRP1BQ14684 758 aaKnown RBP7.96□□□□□ -1.13
RTN4-205ENST00000394609 STK38Q15208 465 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 SF3A1Q15459 793 aaKnown RBP7.96□□□□□ -1.13
RTN4-205ENST00000394609 ANO1Q5XXA6 986 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 LINC00301Q8NCQ3 95 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 RGS22Q8NE09 1264 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 BICD2Q8TD16 824 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 GPKOWQ92917 476 aaPredicted RBP eCLIP7.96□□□□□ -1.13
RTN4-205ENST00000394609 SYAP1Q96A49 352 aaPredicted RBP7.96□□□□□ -1.13
RTN4-205ENST00000394609 CCDC17Q96LX7 622 aa7.96□□□□□ -1.13
RTN4-205ENST00000394609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.96□□□□□ -1.13
RTN4-205ENST00000394609 TCHHQ07283 1943 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 LTBP3Q9NS15 1303 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 FZD9O00144 591 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 ADAMTS3O15072 1205 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 MYO1BO43795 1136 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 LETM1O95202 739 aaPredicted RBP7.96□□□□□ -1.14
RTN4-205ENST00000394609 GH2P01242 217 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 PDHBP11177 359 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 EEF2P13639 858 aaKnown RBP7.96□□□□□ -1.14
RTN4-205ENST00000394609 MARCKSP29966 332 aaPredicted RBP7.96□□□□□ -1.14
RTN4-205ENST00000394609 NLRP5P59047 1200 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 SEPT2Q15019 361 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 CAMK4Q16566 473 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 PFKFB3Q16875 520 aaPredicted RBP7.96□□□□□ -1.14
RTN4-205ENST00000394609 TBC1D10BQ4KMP7 808 aaPredicted RBP7.96□□□□□ -1.14
RTN4-205ENST00000394609 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.14
RTN4-205ENST00000394609 TATDN1Q6P1N9 297 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 MIGA2Q7L4E1 593 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 HOMER1Q86YM7 354 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 FAM151AQ8WW52 585 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 PHF20Q9BVI0 1012 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 FOXP1Q9H334 677 aaPredicted RBP7.96□□□□□ -1.14
RTN4-205ENST00000394609 CABP5Q9NP86 173 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 GPCPD1Q9NPB8 672 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 POLR3EQ9NVU0 708 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 DACT1Q9NYF0 836 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 PCDHA7Q9UN72 937 aa7.96□□□□□ -1.14
RTN4-205ENST00000394609 CDK5RAP2Q96SN8 1893 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 BAZ2BQ9UIF8 2168 aaKnown RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 CNTNAP1P78357 1384 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 ATRNL1Q5VV63 1379 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 PLIN4Q96Q06 1357 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 ASTN2O75129 1339 aaPredicted RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 ZNF541Q9H0D2 1346 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 MYH1P12882 1939 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 SPTLC2O15270 562 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 KRT2P35908 639 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 TOB1P50616 345 aaPredicted RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 ABCB5Q2M3G0 1257 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 EARS2Q5JPH6 523 aaKnown RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 CCDC183Q5T5S1 534 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 HEATR3Q7Z4Q2 680 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 METTL16Q86W50 562 aaKnown RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 SIAH1Q8IUQ4 282 aa7.95□□□□□ -1.14
RTN4-205ENST00000394609 CCAR1Q8IX12 1150 aaKnown RBP7.95□□□□□ -1.14
RTN4-205ENST00000394609 MTMR14Q8NCE2 650 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms