RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TMEM132EQ6IEE7 984 aa14.56□□□□□ -0.08
USP49-203ENST00000394253 MDM2Q00987 491 aaPredicted RBP14.55□□□□□ -0.08
USP49-203ENST00000394253 DHX9Q08211 1270 aaKnown RBP14.55□□□□□ -0.08
USP49-203ENST00000394253 LRRC9Q6ZRR7 1453 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 CERS3Q8IU89 383 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 TTLL11Q8NHH1 800 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 RNF217Q8TC41 542 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 ITM2BQ9Y287 266 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 ANKRD36BQ8N2N9 1353 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 CPP00450 1065 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 CNGA2Q16280 664 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 TMEM60Q9H2L4 133 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 FAM96AQ9H5X1 160 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 MAGEB6P1A0A0J9YX57 407 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 DYTNA2CJ06 578 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 A6NJR5 290 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 MSH2P43246 934 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 PAG1Q9NWQ8 432 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 CYP7A1P22680 504 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 PSMA4P25789 261 aaKnown RBP14.55□□□□□ -0.08
USP49-203ENST00000394253 ITKQ08881 620 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 RRAGAQ7L523 313 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 COQ7Q99807 217 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 SLF1Q9BQI6 1058 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 L3MBTL1Q9Y468 752 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 PDHA1P08559 390 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 DNM2P50570 870 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 NCLNQ969V3 563 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 DEXIO95424 95 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 ZNF445P59923 1031 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 YWHAGP61981 247 aaKnown RBP eCLIP14.55□□□□□ -0.08
USP49-203ENST00000394253 NR5A1Q13285 461 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 CAB39Q9Y376 341 aaPredicted RBP14.55□□□□□ -0.08
USP49-203ENST00000394253 FBXW4P57775 412 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 SLC12A1Q13621 1099 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 ZBTB18Q99592 522 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 LRRC2Q9BYS8 371 aa14.55□□□□□ -0.08
USP49-203ENST00000394253 NCF2P19878 526 aaPredicted RBP14.54□□□□□ -0.08
USP49-203ENST00000394253 PPARGP37231 505 aaPredicted RBP14.54□□□□□ -0.08
USP49-203ENST00000394253 OR8K1Q8NGG5 319 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 DNM3Q9UQ16 869 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 EPRSP07814 1512 aaKnown RBP14.54□□□□□ -0.08
USP49-203ENST00000394253 ADCY3O60266 1144 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 ANGPTL8Q6UXH0 198 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 KIF2CQ99661 725 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 SGK1O00141 431 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 CNGA3Q16281 694 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 CALCRLQ16602 461 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 GNPTABQ3T906 1256 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 KCTD16Q68DU8 428 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 ABHD8Q96I13 439 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 SLC4A7Q9Y6M7 1214 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
USP49-203ENST00000394253 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
USP49-203ENST00000394253 GUCY2DQ02846 1103 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 CADPS2Q86UW7 1296 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 TRPV6Q9H1D0 765 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 PARVBQ9HBI1 364 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 GID8Q9NWU2 228 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 TSTA3Q13630 321 aaPredicted RBP14.54□□□□□ -0.08
USP49-203ENST00000394253 PUM3Q15397 648 aaKnown RBP14.54□□□□□ -0.08
USP49-203ENST00000394253 SH3GL1Q99961 368 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 NOD1Q9Y239 953 aa14.54□□□□□ -0.08
USP49-203ENST00000394253 M0QZ92 97 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 CD19P15391 556 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 BBS5Q8N3I7 341 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 POC1B-GALNT4F8VUJ3 575 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 EXOC3O60645 756 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 PTCD1O75127 700 aaKnown RBP14.53□□□□□ -0.08
USP49-203ENST00000394253 ALDH1L1O75891 902 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 RPN1P04843 607 aaKnown RBP14.53□□□□□ -0.08
USP49-203ENST00000394253 PPP1R2P3Q6NXS1 205 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 CNPY4Q8N129 248 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 LZTS2Q9BRK4 669 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 NFE2L3Q9Y4A8 694 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 IFNAR2P48551 515 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 ANO1Q5XXA6 986 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 RINLQ6ZS11 566 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 NT5C3AQ9H0P0 336 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 KIF9Q9HAQ2 790 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 TADA2BQ86TJ2 420 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 TRIM11Q96F44 468 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 CABP1Q9NZU7 370 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 RASSF9O75901 435 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 MAP4P27816 1152 aaKnown RBP14.53□□□□□ -0.08
USP49-203ENST00000394253 APOBRQ0VD83 1088 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 LPXNO60711 386 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 RRS1Q15050 365 aaKnown RBP14.53□□□□□ -0.08
USP49-203ENST00000394253 KIF19Q2TAC6 998 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 DHX38Q92620 1227 aaKnown RBP14.53□□□□□ -0.08
USP49-203ENST00000394253 KIAA1107Q9UPP5 1409 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 PSMA3P25788 255 aa14.53□□□□□ -0.08
USP49-203ENST00000394253 CAPRIN1Q14444 709 aaKnown RBP14.52□□□□□ -0.08
USP49-203ENST00000394253 AHI1Q8N157 1196 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 CYTH2Q99418 400 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 TTC21BQ7Z4L5 1316 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 CNBD2Q96M20 576 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 SLC24A3Q9HC58 644 aa14.52□□□□□ -0.08
USP49-203ENST00000394253 TNNI1P19237 187 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms