RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 CDC27P30260 824 aa17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 RGS2P41220 211 aa17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 IRF5Q13568 498 aa17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 SLC35G1Q2M3R5 365 aa17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 MORN1Q5T089 497 aa17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 FBXO46Q6PJ61 603 aaPredicted RBP17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 CPLX2Q6PUV4 134 aaKnown RBP17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 RAET1EQ8TD07 263 aa17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 MMP19Q99542 508 aa17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 PTPN22Q9Y2R2 807 aa17.6■□□□□ 0.41
NDUFC1-202ENST00000394225 PFASO15067 1338 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 CPLX1O14810 134 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 ADD1P35611 737 aaKnown RBP17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 FLT3LGP49771 235 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 MAP2K5Q13163 448 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 USH1GQ495M9 461 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 ANKRD35Q8N283 1001 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 CCDC82Q8N4S0 544 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 LARP6Q9BRS8 491 aaKnown RBP17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 SLKQ9H2G2 1235 aaPredicted RBP17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 RBM27Q9P2N5 1060 aaKnown RBP17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 GJD2Q9UKL4 321 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 TPCN1Q9ULQ1 816 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 GABRQQ9UN88 632 aa17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 MRPL11Q9Y3B7 192 aaKnown RBP17.59■□□□□ 0.41
NDUFC1-202ENST00000394225 BAZ2BQ9UIF8 2168 aaKnown RBP17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 PFKFB2O60825 505 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 XRCC5P13010 732 aaKnown RBP17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 ADORA2AP29274 412 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 CCT2P78371 535 aaKnown RBP17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 STK3Q13188 491 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 DPP9Q86TI2 863 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 USP6NLQ92738 828 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 DDX11Q96FC9 970 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 APBA2Q99767 749 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 MAF1Q9H063 256 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 PCDHA1Q9Y5I3 950 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 DOCK3Q8IZD9 2030 aa17.58■□□□□ 0.4
NDUFC1-202ENST00000394225 CDKL5O76039 1030 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 HOXC6P09630 235 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 IFNAR1P17181 557 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 CYP2B6P20813 491 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 FUT2Q10981 343 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 NOL8Q76FK4 1167 aaKnown RBP17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 MCF2L2Q86YR7 1114 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 TRMT44Q8IYL2 757 aaKnown RBP17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 SLAIN1Q8ND83 568 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 PXYLP1Q8TE99 480 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 ZSCAN31Q96LW9 406 aaPredicted RBP17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 MCOLN1Q9GZU1 580 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 NCOA5Q9HCD5 579 aaKnown RBP17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 LIMCH1Q9UPQ0 1083 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 PTCH2Q9Y6C5 1203 aa17.57■□□□□ 0.4
NDUFC1-202ENST00000394225 hCG_1984214I3L0E3 225 aa17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 PPP1R11O60927 126 aaPredicted RBP17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 AKAP17AQ02040 695 aaKnown RBP17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 MUM1L1Q5H9M0 696 aa17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 NSMFQ6X4W1 530 aa17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 TRIM22Q8IYM9 498 aa17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 ZNF713Q8N859 430 aaPredicted RBP17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 RGS22Q8NE09 1264 aa17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 A1CFQ9NQ94 594 aaKnown RBP17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 DIS3Q9Y2L1 958 aaKnown RBP17.56■□□□□ 0.4
NDUFC1-202ENST00000394225 NFIBO00712 420 aa17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 TAL1P17542 331 aaPredicted RBP17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 MCM2P49736 904 aa17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 SCRN1Q12765 414 aa17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 NTRK3Q16288 839 aa17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 COL13A1Q5TAT6 717 aaPredicted RBP17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 SAMD3Q8N6K7 520 aa17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 CLEC4DQ8WXI8 215 aa17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 RNF26Q9BY78 433 aaPredicted RBP17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 V9GY48 417 aaPredicted RBP17.55■□□□□ 0.4
NDUFC1-202ENST00000394225 RBBP6Q7Z6E9 1792 aaKnown RBP17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 POTEB2H3BUK9 544 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 PRPF3O43395 683 aaKnown RBP17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 ADCY3O60266 1144 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 ME3Q16798 604 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 SLC9C1Q4G0N8 1177 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 RNF207Q6ZRF8 634 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 GTF3C6Q969F1 213 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 SH2B1Q9NRF2 756 aaPredicted RBP17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 CYP39A1Q9NYL5 469 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 ZNFX1Q9P2E3 1918 aaKnown RBP17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 SMCHD1A6NHR9 2005 aa17.54■□□□□ 0.4
NDUFC1-202ENST00000394225 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 hCG_1642624A0A1W2PR95 340 aa17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 COBLO75128 1261 aa17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 PGK2P07205 417 aa17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 GRK4P32298 578 aa17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 BAATQ14032 418 aaPredicted RBP17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 PFKFB3Q16875 520 aaPredicted RBP17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 ZNF792Q3KQV3 632 aa17.53■□□□□ 0.4
NDUFC1-202ENST00000394225 PPP1R18Q6NYC8 613 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms