RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 TRIM49BA6NDI0 452 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 FOXN1O15353 648 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 DDIT3P35638 169 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 KLHL30Q0D2K2 578 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 SMAD1Q15797 465 aaKnown RBP10.09□□□□□ -0.79
CDH11-202ENST00000394156 DALRD3Q5D0E6 543 aaKnown RBP10.09□□□□□ -0.79
CDH11-202ENST00000394156 DPY19L2Q6NUT2 758 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 SCARA5Q6ZMJ2 495 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 CTTNBP2NLQ9P2B4 639 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 TNS3Q68CZ2 1445 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 IFI16Q16666 785 aaKnown RBP10.09□□□□□ -0.79
CDH11-202ENST00000394156 DAAM2Q86T65 1068 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 GJD4Q96KN9 370 aaPredicted RBP10.09□□□□□ -0.79
CDH11-202ENST00000394156 CPSF1Q10570 1443 aaKnown RBP10.09□□□□□ -0.79
CDH11-202ENST00000394156 DAPK3O43293 454 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 STAT2P52630 851 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 NFIXQ14938 502 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 NECTIN1Q15223 517 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 MTERF2Q49AM1 385 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 ZNF653Q96CK0 615 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 ABCB11O95342 1321 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 POTEMA6NI47 508 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 USP17L10C9JJH3 530 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 RBL2Q08999 1139 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 CCDC91Q7Z6B0 441 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 CEP95Q96GE4 821 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 BSDC1Q9NW68 430 aaPredicted RBP10.09□□□□□ -0.79
CDH11-202ENST00000394156 PCDHA4Q9UN74 947 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 PTPRMP28827 1452 aa10.09□□□□□ -0.79
CDH11-202ENST00000394156 GOLGA6L7A0A1B0GV03 622 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 BUB1BO60566 1050 aaPredicted RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 PPM1KQ8N3J5 372 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 ABT1Q9ULW3 272 aaKnown RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 FZD1Q9UP38 647 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 PCDHA5Q9Y5H7 936 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 NEXMIFQ5QGS0 1516 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 FER1L4A9Z1Z3 1794 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 SOWAHDA6NJG2 315 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 F5H423 210 aaPredicted RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 RPL13P26373 211 aaKnown RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 LIG4P49917 911 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 RASSF7Q02833 373 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 SEPT2Q15019 361 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 UBE3CQ15386 1083 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 POMGNT1Q8WZA1 660 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 CUL4BQ13620 913 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 TTBK2Q6IQ55 1244 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 DPP9Q86TI2 863 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 DEPTORQ8TB45 409 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 CEP83Q9Y592 693 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 KIF24Q5T7B8 1368 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 WTIPA6NIX2 430 aaPredicted RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 DYNC1I1O14576 645 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 CCDC172P0C7W6 258 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 SPAG1Q07617 926 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 ZRSR2Q15696 482 aaKnown RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 CNGA4Q8IV77 575 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 SERPINB13Q9UIV8 391 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 PTPRUQ92729 1446 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 CKAP4Q07065 602 aaKnown RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 CEP112Q8N8E3 955 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 IPO4Q8TEX9 1081 aaKnown RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 LEMD3Q9Y2U8 911 aa10.08□□□□□ -0.8
CDH11-202ENST00000394156 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.08□□□□□ -0.8
CDH11-202ENST00000394156 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 ATP1A3P13637 1013 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 SNX1Q13596 522 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 CDC37Q16543 378 aaPredicted RBP10.07□□□□□ -0.8
CDH11-202ENST00000394156 FBXO18Q8NFZ0 1043 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 STRBPQ96SI9 672 aaKnown RBP10.07□□□□□ -0.8
CDH11-202ENST00000394156 NAPGQ99747 312 aaPredicted RBP10.07□□□□□ -0.8
CDH11-202ENST00000394156 TECPR2O15040 1411 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 MMP1P03956 469 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 PLCG1P19174 1290 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 CASP14P31944 242 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 SFMBT2Q5VUG0 894 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 FAM178BQ8IXR5 827 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 HMGB2P26583 209 aaKnown RBP10.07□□□□□ -0.8
CDH11-202ENST00000394156 MXRA7P84157 204 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 STOX1Q6ZVD7 989 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 UBE2Q2Q8WVN8 375 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 GOLGA6L9A6NEM1 432 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 TMOD1P28289 359 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 ZNF445P59923 1031 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 ADAM9Q13443 819 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 CASC4Q6P4E1 433 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 POTEDQ86YR6 584 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 CNOT6LQ96LI5 555 aaKnown RBP10.07□□□□□ -0.8
CDH11-202ENST00000394156 KIF28PB7ZC32 967 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 ARPP19P56211 112 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 ACRBPQ8NEB7 543 aa10.07□□□□□ -0.8
CDH11-202ENST00000394156 STX10O60499 249 aa10.06□□□□□ -0.8
CDH11-202ENST00000394156 PIK3CAP42336 1068 aa10.06□□□□□ -0.8
CDH11-202ENST00000394156 NUMBP49757 651 aa10.06□□□□□ -0.8
CDH11-202ENST00000394156 KIF23Q02241 960 aaPredicted RBP10.06□□□□□ -0.8
CDH11-202ENST00000394156 BMS1Q14692 1282 aaKnown RBP10.06□□□□□ -0.8
CDH11-202ENST00000394156 SEL1L2Q5TEA6 688 aa10.06□□□□□ -0.8
CDH11-202ENST00000394156 SYDE2Q5VT97 1194 aa10.06□□□□□ -0.8
CDH11-202ENST00000394156 DCUN1D2Q6PH85 259 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms