RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 FDX1P10109 184 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 MCM5P33992 734 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 MNX1P50219 401 aaPredicted RBP8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 TROAPQ12815 778 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 BAATQ14032 418 aaPredicted RBP8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 GRM4Q14833 912 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 SART3Q15020 963 aaKnown RBP8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 QRICH1Q2TAL8 776 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 SLC30A10Q6XR72 485 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 UBE2Q1Q7Z7E8 422 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 HOMER1Q86YM7 354 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 CMTR1Q8N1G2 835 aaKnown RBP8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 CLEC4DQ8WXI8 215 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 PIBF1Q8WXW3 757 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 PAWRQ96IZ0 340 aaKnown RBP8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 JMJD4Q9H9V9 463 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 FBXO40Q9UH90 709 aa8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 DDX20Q9UHI6 824 aaKnown RBP8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 ZHX1Q9UKY1 873 aaPredicted RBP8.95□□□□□ -0.98
HMGB3P1-201ENST00000393368 PTPDC1A2A3K4 754 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 KLRF2D3W0D1 207 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 POTEB2H3BUK9 544 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 PPP1R11O60927 126 aaPredicted RBP8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 PLEKHA8P1O95397 391 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 SNAI1O95863 264 aaPredicted RBP8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 ZNF865P0CJ78 1059 aaPredicted RBP8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 PTGS1P23219 599 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 CALML3P27482 149 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 TKFCQ3LXA3 575 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 RNF20Q5VTR2 975 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 CATIPQ7Z7H3 387 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 ZNF654Q8IZM8 581 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 FAM133AQ8N9E0 248 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 TBC1D5Q92609 795 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 JAKMIP1Q96N16 626 aaKnown RBP8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 NEK1Q96PY6 1258 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 PIGSQ96S52 555 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 CYP39A1Q9NYL5 469 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 OGDHLQ9ULD0 1010 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 DIS3Q9Y2L1 958 aaKnown RBP8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 SNX14Q9Y5W7 946 aa8.94□□□□□ -0.98
HMGB3P1-201ENST00000393368 CCDC69A6NI79 296 aa8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 ADCY6O43306 1168 aa8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 CYTH3O43739 400 aa8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 HSPA4P34932 840 aa8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 GJC2Q5T442 439 aaPredicted RBP8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 ARMCX2Q7L311 632 aa8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 EEPD1Q7L9B9 569 aa8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 WDR19Q8NEZ3 1342 aa8.93□□□□□ -0.98
HMGB3P1-201ENST00000393368 PFASO15067 1338 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 SYNGAP1Q96PV0 1343 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 hCG_1642624A0A1W2PR95 340 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 SEPT4O43236 478 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 DDAH1O94760 285 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 REC8O95072 547 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 PGK1P00558 417 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 PRR29P0C7W0 189 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 RPS6P62753 249 aaKnown RBP8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 EXOSC10Q01780 885 aaKnown RBP8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 TMEM63BQ5T3F8 832 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 MAMDC4Q6UXC1 1216 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 RNF207Q6ZRF8 634 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 DHX32Q7L7V1 743 aaKnown RBP8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 MICU3Q86XE3 530 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 FBXO11Q86XK2 927 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 FBXO16Q8IX29 292 aaPredicted RBP8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 CCDC82Q8N4S0 544 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 KCNB2Q92953 911 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 TMEM87BQ96K49 555 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 KATNBL1Q9H079 304 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 C11orf49Q9H6J7 331 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 COL20A1Q9P218 1284 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 BRPF3Q9ULD4 1205 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 CNPY2Q9Y2B0 182 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 SLC12A7Q9Y666 1083 aa8.92□□□□□ -0.98
HMGB3P1-201ENST00000393368 KIAA0100Q14667 2235 aaKnown RBP8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 ABCB11O95342 1321 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 MYADML2A6NDP7 307 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 OPLAHO14841 1288 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 ZBTB5O15062 677 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 LIFRP42702 1097 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 ALDH5A1P51649 535 aaPredicted RBP8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 ACVR2BQ13705 512 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 KRT32Q14532 448 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 TSGA10IPQ3SY00 556 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 NECAB2Q7Z6G3 386 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 ZNF467Q7Z7K2 595 aaPredicted RBP8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 SRBD1Q8N5C6 995 aaKnown RBP8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 ANKLE1Q8NAG6 615 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 CTCFLQ8NI51 663 aaPredicted RBP8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 DPF3Q92784 378 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 MTMR8Q96EF0 704 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 USP26Q9BXU7 913 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 RIOX1Q9H6W3 641 aa8.91□□□□□ -0.98
HMGB3P1-201ENST00000393368 PDGFCQ9NRA1 345 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms