RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 PANX2Q96RD6 677 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 BAG1Q99933 345 aaPredicted RBP16.11■□□□□ 0.17
MKS1-203ENST00000393120 C7orf25Q9BPX7 421 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 GLT8D2Q9H1C3 349 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 EP400Q96L91 3159 aa16.11■□□□□ 0.17
MKS1-203ENST00000393120 MPHOSPH10O00566 681 aaKnown RBP16.1■□□□□ 0.17
MKS1-203ENST00000393120 PRCPP42785 496 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 MRPL12P52815 198 aaKnown RBP16.1■□□□□ 0.17
MKS1-203ENST00000393120 RBM10P98175 930 aaKnown RBP16.1■□□□□ 0.17
MKS1-203ENST00000393120 PDIA5Q14554 519 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 SLC15A2Q16348 729 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 KMT5BQ4FZB7 885 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 GRIPAP1Q4V328 841 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 GIMAP8Q8ND71 665 aaPredicted RBP16.1■□□□□ 0.17
MKS1-203ENST00000393120 DCAF4Q8WV16 495 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 TMEM260Q9NX78 707 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 ITIH6Q6UXX5 1313 aa16.1■□□□□ 0.17
MKS1-203ENST00000393120 DDTLA6NHG4 134 aaPredicted RBP16.09■□□□□ 0.17
MKS1-203ENST00000393120 ZSCAN12O43309 604 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 EDIL3O43854 480 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 PPP1R11O60927 126 aaPredicted RBP16.09■□□□□ 0.17
MKS1-203ENST00000393120 PLCG1P19174 1290 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 CERKLQ49MI3 558 aaPredicted RBP16.09■□□□□ 0.17
MKS1-203ENST00000393120 TNS1Q9HBL0 1735 aaKnown RBP16.09■□□□□ 0.17
MKS1-203ENST00000393120 AKR1B15C9JRZ8 316 aaPredicted RBP16.09■□□□□ 0.17
MKS1-203ENST00000393120 TEX33O43247 280 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 ENTPD3O75355 529 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 PPP1R2P41236 205 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 AMPD3Q01432 767 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 CALCRLQ16602 461 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 TTBK2Q6IQ55 1244 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 ANKRD20A12PQ8NF67 263 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 LRRC15Q8TF66 581 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 CUL5Q93034 780 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 MMTAG2Q9BU76 263 aaKnown RBP16.09■□□□□ 0.17
MKS1-203ENST00000393120 ADAMTSL1Q8N6G6 1762 aa16.09■□□□□ 0.17
MKS1-203ENST00000393120 SLX4Q8IY92 1834 aa16.08■□□□□ 0.17
MKS1-203ENST00000393120 COL2A1P02458 1487 aaPredicted RBP16.08■□□□□ 0.17
MKS1-203ENST00000393120 CHRNA5P30532 468 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 TECP42680 631 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 STIM1Q13586 685 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 CCDC96Q2M329 555 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 ZNF592Q92610 1267 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 CCDC47Q96A33 483 aaKnown RBP16.08■□□□□ 0.16
MKS1-203ENST00000393120 DHTKD1Q96HY7 919 aaPredicted RBP16.08■□□□□ 0.16
MKS1-203ENST00000393120 NAP1L4Q99733 375 aaKnown RBP16.08■□□□□ 0.16
MKS1-203ENST00000393120 NAA15Q9BXJ9 866 aaKnown RBP16.08■□□□□ 0.16
MKS1-203ENST00000393120 RAB34Q9BZG1 259 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 TRIM9Q9C026 710 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 GDAQ9Y2T3 454 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 ATRNL1Q5VV63 1379 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 MYH8P13535 1937 aa16.08■□□□□ 0.16
MKS1-203ENST00000393120 GOLGA6L9A6NEM1 432 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 USP17L10C9JJH3 530 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 EEF2P13639 858 aaKnown RBP16.07■□□□□ 0.16
MKS1-203ENST00000393120 HOXA7P31268 230 aaPredicted RBP16.07■□□□□ 0.16
MKS1-203ENST00000393120 RBM5P52756 815 aaKnown RBP eCLIP16.07■□□□□ 0.16
MKS1-203ENST00000393120 KRT31Q15323 416 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 PTPN21Q16825 1174 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 COBLL1Q53SF7 1204 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 TMEM179Q6ZVK1 233 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 PPFIBP1Q86W92 1011 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 REXO1L1PQ8IX06 675 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 CALML4Q96GE6 196 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 STK17AQ9UEE5 414 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 PCDHAC2Q9Y5I4 1007 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 ZNF646O15015 1829 aaPredicted RBP16.07■□□□□ 0.16
MKS1-203ENST00000393120 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
MKS1-203ENST00000393120 CACNB3P54284 484 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 ADKP55263 362 aaKnown RBP16.07■□□□□ 0.16
MKS1-203ENST00000393120 ETF1P62495 437 aaKnown RBP16.07■□□□□ 0.16
MKS1-203ENST00000393120 TCP10Q12799 353 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 AOC3Q16853 763 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 SIAH1Q8IUQ4 282 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 NOC3LQ8WTT2 800 aaKnown RBP16.07■□□□□ 0.16
MKS1-203ENST00000393120 ANKRD7Q92527 254 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 CAMKK2Q96RR4 588 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 PSTPIP2Q9H939 334 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 SYNPO2Q9UMS6 1093 aa16.07■□□□□ 0.16
MKS1-203ENST00000393120 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
MKS1-203ENST00000393120 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.07■□□□□ 0.164e-6■■■□□ 15.3
MKS1-203ENST00000393120 KCNJ18B7U540 433 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 PSMA7O14818 248 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 FECHP22830 423 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 TXKP42681 527 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 SLC1A4P43007 532 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 COPB1P53618 953 aaKnown RBP16.06■□□□□ 0.16
MKS1-203ENST00000393120 ATP2B2Q01814 1243 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 GOLGA8FQ08AF8 430 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 GOLGA8DPQ0D2H9 430 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 KCNJ12Q14500 433 aa16.06■□□□□ 0.16
MKS1-203ENST00000393120 SLFN13Q68D06 897 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms