RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 AOPEPQ8N6M6 819 aa17.02■□□□□ 0.31
MKS1-202ENST00000393119 ZNF579Q8NAF0 562 aaKnown RBP17.02■□□□□ 0.31
MKS1-202ENST00000393119 LRRC15Q8TF66 581 aa17.02■□□□□ 0.31
MKS1-202ENST00000393119 DCAF4Q8WV16 495 aa17.02■□□□□ 0.31
MKS1-202ENST00000393119 SLC37A4O43826 429 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 DDNO94850 711 aaPredicted RBP17.01■□□□□ 0.31
MKS1-202ENST00000393119 SPC24Q8NBT2 197 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 INPP5BP32019 993 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 TRAPPC10P48553 1259 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 PRKG1Q13976 671 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
MKS1-202ENST00000393119 UVSSAQ2YD98 709 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 GMCL1P1Q8NEA9 526 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 TBC1D5Q92609 795 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 TIGD1Q96MW7 591 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 BLZF1Q9H2G9 400 aa17.01■□□□□ 0.31
MKS1-202ENST00000393119 YBX3P16989 372 aaKnown RBP eCLIP17■□□□□ 0.319e-6■□□□□ 10.4
MKS1-202ENST00000393119 CCDC174Q6PII3 467 aa17■□□□□ 0.31
MKS1-202ENST00000393119 CCDC12Q8WUD4 166 aaPredicted RBP17■□□□□ 0.31
MKS1-202ENST00000393119 MTRQ99707 1265 aa17■□□□□ 0.31
MKS1-202ENST00000393119 PSTPIP2Q9H939 334 aa17■□□□□ 0.31
MKS1-202ENST00000393119 ZKSCAN5Q9Y2L8 839 aa17■□□□□ 0.31
MKS1-202ENST00000393119 TMX2Q9Y320 296 aa17■□□□□ 0.31
MKS1-202ENST00000393119 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
MKS1-202ENST00000393119 SYDE2Q5VT97 1194 aa17■□□□□ 0.31
MKS1-202ENST00000393119 FKBP1CQ5VVH2 108 aa17■□□□□ 0.31
MKS1-202ENST00000393119 GALNT17Q6IS24 598 aa17■□□□□ 0.31
MKS1-202ENST00000393119 NEK8Q86SG6 692 aa17■□□□□ 0.31
MKS1-202ENST00000393119 FERMT2Q96AC1 680 aa17■□□□□ 0.31
MKS1-202ENST00000393119 KIFC2Q96AC6 838 aa17■□□□□ 0.31
MKS1-202ENST00000393119 ANO10Q9NW15 660 aa17■□□□□ 0.31
MKS1-202ENST00000393119 PRR12Q9ULL5 1215 aa17■□□□□ 0.31
MKS1-202ENST00000393119 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
MKS1-202ENST00000393119 HOXA13P31271 388 aaPredicted RBP16.99■□□□□ 0.31
MKS1-202ENST00000393119 POSTNQ15063 836 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 KRT25Q7Z3Z0 450 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 ZKSCAN4Q969J2 545 aaPredicted RBP16.99■□□□□ 0.31
MKS1-202ENST00000393119 GMCL1Q96IK5 515 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 SYT17Q9BSW7 474 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 ZNF341Q9BYN7 854 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 RIC8AQ9NPQ8 531 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 TUBE1Q9UJT0 475 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 COBLO75128 1261 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 TECP42680 631 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 HSP90AA4PQ58FG1 418 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 DPF2Q92785 391 aa16.99■□□□□ 0.31
MKS1-202ENST00000393119 ZFP91Q96JP5 570 aaPredicted RBP16.99■□□□□ 0.31
MKS1-202ENST00000393119 OPLAHO14841 1288 aa16.98■□□□□ 0.31
MKS1-202ENST00000393119 TBC1D12O60347 775 aa16.98■□□□□ 0.31
MKS1-202ENST00000393119 RPS12P25398 132 aaKnown RBP16.98■□□□□ 0.31
MKS1-202ENST00000393119 CLK2P49760 499 aaKnown RBP16.98■□□□□ 0.31
MKS1-202ENST00000393119 NLRP12P59046 1061 aa16.98■□□□□ 0.31
MKS1-202ENST00000393119 PAGE5Q96GU1 130 aa16.98■□□□□ 0.31
MKS1-202ENST00000393119 ARHGEF10LQ9HCE6 1279 aa16.98■□□□□ 0.31
MKS1-202ENST00000393119 MAN1B1Q9UKM7 699 aa16.98■□□□□ 0.31
MKS1-202ENST00000393119 R3HCC1Q9Y3T6 440 aaKnown RBP16.98■□□□□ 0.31
MKS1-202ENST00000393119 SMCHD1A6NHR9 2005 aa16.98■□□□□ 0.31
MKS1-202ENST00000393119 ESYT2A0FGR8 921 aa16.97■□□□□ 0.31
MKS1-202ENST00000393119 DYNC1I1O14576 645 aa16.97■□□□□ 0.31
MKS1-202ENST00000393119 TXKP42681 527 aa16.97■□□□□ 0.31
MKS1-202ENST00000393119 RBM10P98175 930 aaKnown RBP16.97■□□□□ 0.31
MKS1-202ENST00000393119 DTHD1Q6ZMT9 781 aa16.97■□□□□ 0.31
MKS1-202ENST00000393119 SMYD4Q8IYR2 804 aaPredicted RBP16.97■□□□□ 0.31
MKS1-202ENST00000393119 E2F4Q16254 413 aa16.97■□□□□ 0.31
MKS1-202ENST00000393119 PTPN21Q16825 1174 aa16.97■□□□□ 0.31
MKS1-202ENST00000393119 MEIS2O14770 477 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 NEMFO60524 1076 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 MAP3K10Q02779 954 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 SLC30A10Q6XR72 485 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 MTERF4Q7Z6M4 381 aaKnown RBP16.96■□□□□ 0.31
MKS1-202ENST00000393119 CUL5Q93034 780 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 GGA3Q9NZ52 723 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 GPRC5DQ9NZD1 345 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 NRBP1Q9UHY1 535 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 BMP15O95972 392 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 LMNB1P20700 586 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 CEP57L1Q8IYX8 460 aa16.96■□□□□ 0.31
MKS1-202ENST00000393119 UQCRHLA0A096LP55 91 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 BECN2A8MW95 431 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 H7C1D1 291 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 UQCRHP07919 91 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 STAT2P52630 851 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 CUL4BQ13620 913 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 NCAPHQ15003 741 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 NAALADL2Q58DX5 795 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 FBXO11Q86XK2 927 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 SMAP1Q8IYB5 467 aaPredicted RBP16.95■□□□□ 0.3
MKS1-202ENST00000393119 VCPKMTQ9H867 229 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 RNF181Q9P0P0 153 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 OR52Z1P0C646 297 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 SLFN14P0C7P3 912 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 PPP4R3BQ5MIZ7 849 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 PDXDC2PQ6P474 469 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 TRMT44Q8IYL2 757 aaKnown RBP16.95■□□□□ 0.3
MKS1-202ENST00000393119 MED15Q96RN5 788 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 FEZ1Q99689 392 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 TRIM5Q9C035 493 aa16.95■□□□□ 0.3
MKS1-202ENST00000393119 POTEMA6NI47 508 aa16.94■□□□□ 0.3
MKS1-202ENST00000393119 PTMAP06454 111 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms