RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 VWA5AO00534 786 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 PSMC4P43686 418 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 ZNF543Q08ER8 600 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 TMEM87AQ8NBN3 555 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 REPS2Q8NFH8 660 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 MAD2L2Q9UI95 211 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 PARP1P09874 1014 aaKnown RBP15.62■□□□□ 0.09
PTN-202ENST00000393083 STAT2P52630 851 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 KIF22Q14807 665 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 TMEM132BQ14DG7 1078 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 CSPP1Q1MSJ5 1256 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 CCDC96Q2M329 555 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 SKOR2Q2VWA4 1001 aaPredicted RBP15.62■□□□□ 0.09
PTN-202ENST00000393083 TTBK2Q6IQ55 1244 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
PTN-202ENST00000393083 BTNL9Q6UXG8 535 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 OTOP1Q7RTM1 612 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 CTU1Q7Z7A3 348 aaKnown RBP15.62■□□□□ 0.09
PTN-202ENST00000393083 FAM160B2Q86V87 743 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 STAG2Q8N3U4 1231 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 CHURC1Q8WUH1 139 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 KIFC2Q96AC6 838 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 PORCNQ9H237 461 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 ZSWIM8A7E2V4 1837 aa15.62■□□□□ 0.09
PTN-202ENST00000393083 FRMPD2Q68DX3 1309 aaPredicted RBP15.61■□□□□ 0.09
PTN-202ENST00000393083 PALM3A6NDB9 673 aaPredicted RBP15.61■□□□□ 0.09
PTN-202ENST00000393083 ECM2O94769 699 aaPredicted RBP15.61■□□□□ 0.09
PTN-202ENST00000393083 EFCC1Q9HA90 598 aa15.61■□□□□ 0.09
PTN-202ENST00000393083 GPCPD1Q9NPB8 672 aa15.61■□□□□ 0.09
PTN-202ENST00000393083 RBM27Q9P2N5 1060 aaKnown RBP15.61■□□□□ 0.09
PTN-202ENST00000393083 TRIM17Q9Y577 477 aa15.61■□□□□ 0.09
PTN-202ENST00000393083 V9GY48 417 aaPredicted RBP15.61■□□□□ 0.09
PTN-202ENST00000393083 hCG_1642624A0A1W2PR95 340 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 KIF28PB7ZC32 967 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 GNRH1P01148 92 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 GOLGA8HP0CJ92 632 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 XBP1P17861 261 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 FCGRTP55899 365 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 PKN1Q16512 942 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 GPATCH4Q5T3I0 446 aaKnown RBP15.6■□□□□ 0.09
PTN-202ENST00000393083 BRAPQ7Z569 592 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 LZTS2Q9BRK4 669 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 MOV10L1Q9BXT6 1211 aaKnown RBP15.6■□□□□ 0.09
PTN-202ENST00000393083 SPATC1LQ9H0A9 340 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 SLC38A10Q9HBR0 1119 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 ZNF214Q9UL59 606 aaPredicted RBP15.6■□□□□ 0.09
PTN-202ENST00000393083 PRR12Q9ULL5 1215 aa15.6■□□□□ 0.09
PTN-202ENST00000393083 ISY1Q9ULR0 285 aaKnown RBP15.6■□□□□ 0.09
PTN-202ENST00000393083 DDX49Q9Y6V7 483 aaKnown RBP15.6■□□□□ 0.09
PTN-202ENST00000393083 ATP2A1O14983 1001 aa15.59■□□□□ 0.09
PTN-202ENST00000393083 MMP1P03956 469 aa15.59■□□□□ 0.09
PTN-202ENST00000393083 SLC16A2P36021 539 aa15.59■□□□□ 0.09
PTN-202ENST00000393083 GNL2Q13823 731 aaKnown RBP15.59■□□□□ 0.09
PTN-202ENST00000393083 ARHGEF6Q15052 776 aa15.59■□□□□ 0.09
PTN-202ENST00000393083 ASPRV1Q53RT3 343 aa15.59■□□□□ 0.09
PTN-202ENST00000393083 PIBF1Q8WXW3 757 aa15.59■□□□□ 0.09
PTN-202ENST00000393083 KLRF2D3W0D1 207 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 FDX1P10109 184 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 SCG2P13521 617 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 MAPK4P31152 587 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 CCNA1P78396 465 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 IKQ13123 557 aaPredicted RBP15.58■□□□□ 0.09
PTN-202ENST00000393083 SAFBQ15424 915 aaKnown RBP eCLIP15.58■□□□□ 0.09
PTN-202ENST00000393083 KLHL40Q2TBA0 621 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 ZNF396Q96N95 335 aaPredicted RBP15.58■□□□□ 0.09
PTN-202ENST00000393083 VPS54Q9P1Q0 977 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 TFIP11Q9UBB9 837 aaKnown RBP15.58■□□□□ 0.09
PTN-202ENST00000393083 SRRDQ9UH36 339 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 KCNJ14Q9UNX9 436 aa15.58■□□□□ 0.09
PTN-202ENST00000393083 TNPO2O14787 897 aaKnown RBP15.58■□□□□ 0.08
PTN-202ENST00000393083 ZBED4O75132 1171 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 STAT3P40763 770 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 PLS1Q14651 629 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 PKN2Q16513 984 aaKnown RBP15.58■□□□□ 0.08
PTN-202ENST00000393083 PFKFB3Q16875 520 aaPredicted RBP15.58■□□□□ 0.08
PTN-202ENST00000393083 SYDE2Q5VT97 1194 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 RIOX2Q8IUF8 465 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 SHCBP1Q8NEM2 672 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 SPATA32Q96LK8 384 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 SPZ1Q9BXG8 430 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 SCAND2PQ9GZW5 306 aaPredicted RBP15.58■□□□□ 0.08
PTN-202ENST00000393083 GJD2Q9UKL4 321 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 CFAP45Q9UL16 551 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 PTPN22Q9Y2R2 807 aa15.58■□□□□ 0.08
PTN-202ENST00000393083 MGAMO43451 1857 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 ZNF536O15090 1300 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 COL11A1P12107 1806 aaPredicted RBP15.57■□□□□ 0.08
PTN-202ENST00000393083 CYTH3O43739 400 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 GADD45BO75293 160 aaPredicted RBP15.57■□□□□ 0.08
PTN-202ENST00000393083 MBD3O95983 291 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 ERCC3P19447 782 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 HOXD10P28358 340 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 OAZ1P54368 228 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 SNAP25P60880 206 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 SLC35G1Q2M3R5 365 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 MYSM1Q5VVJ2 828 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 ATL3Q6DD88 541 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 GPR142Q7Z601 462 aa15.57■□□□□ 0.08
PTN-202ENST00000393083 DIS3L2Q8IYB7 885 aaKnown RBP15.57■□□□□ 0.08
PTN-202ENST00000393083 GPT2Q8TD30 523 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms