RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 HMX1Q9NP08 348 aaPredicted RBP18.7■□□□□ 0.58
CSHL1-204ENST00000392824 A1CFQ9NQ94 594 aaKnown RBP18.7■□□□□ 0.58
CSHL1-204ENST00000392824 FLRT1Q9NZU1 646 aa18.7■□□□□ 0.58
CSHL1-204ENST00000392824 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
CSHL1-204ENST00000392824 PFASO15067 1338 aa18.7■□□□□ 0.58
CSHL1-204ENST00000392824 RPTORQ8N122 1335 aa18.7■□□□□ 0.58
CSHL1-204ENST00000392824 TAL1P17542 331 aaPredicted RBP18.69■□□□□ 0.58
CSHL1-204ENST00000392824 SMARCA1P28370 1054 aa18.69■□□□□ 0.58
CSHL1-204ENST00000392824 CACNB2Q08289 660 aaPredicted RBP18.69■□□□□ 0.58
CSHL1-204ENST00000392824 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
CSHL1-204ENST00000392824 PIGSQ96S52 555 aa18.69■□□□□ 0.58
CSHL1-204ENST00000392824 UNC93B1Q9H1C4 597 aa18.69■□□□□ 0.58
CSHL1-204ENST00000392824 RBM28Q9NW13 759 aaKnown RBP18.69■□□□□ 0.58
CSHL1-204ENST00000392824 MRPL11Q9Y3B7 192 aaKnown RBP18.69■□□□□ 0.58
CSHL1-204ENST00000392824 ABCB11O95342 1321 aa18.69■□□□□ 0.58
CSHL1-204ENST00000392824 DNAJC25-GNG10A0A024R161 153 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 PNMA6FA0A0J9YX94 578 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 PTPDC1A2A3K4 754 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 CYP2C19P33261 490 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 APOBRQ0VD83 1088 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 RTN1Q16799 776 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 PIBF1Q8WXW3 757 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 MTMR8Q96EF0 704 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 RRP36Q96EU6 259 aaKnown RBP18.68■□□□□ 0.58
CSHL1-204ENST00000392824 SPZ1Q9BXG8 430 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 UPF3BQ9BZI7 483 aaKnown RBP18.68■□□□□ 0.58
CSHL1-204ENST00000392824 PDRG1Q9NUG6 133 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 CYP39A1Q9NYL5 469 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 SEC63Q9UGP8 760 aaKnown RBP18.68■□□□□ 0.58
CSHL1-204ENST00000392824 PCDHA1Q9Y5I3 950 aa18.68■□□□□ 0.58
CSHL1-204ENST00000392824 COL11A1P12107 1806 aaPredicted RBP18.67■□□□□ 0.58
CSHL1-204ENST00000392824 HTTP42858 3142 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 GOLGA8AA7E2F4 631 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 GOLGA8BA8MQT2 603 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 NFIBO00712 420 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 CYTH3O43739 400 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 GJB1P08034 283 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 RCAN1P53805 252 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 BAATQ14032 418 aaPredicted RBP18.67■□□□□ 0.58
CSHL1-204ENST00000392824 PPP2R5BQ15173 497 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 MAP3K21Q5TCX8 1036 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 MCF2L2Q86YR7 1114 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 CCDC82Q8N4S0 544 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
CSHL1-204ENST00000392824 MSL3Q8N5Y2 521 aaKnown RBP18.67■□□□□ 0.58
CSHL1-204ENST00000392824 CLEC4DQ8WXI8 215 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 TINF2Q9BSI4 451 aa18.67■□□□□ 0.58
CSHL1-204ENST00000392824 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.67■□□□□ 0.58
CSHL1-204ENST00000392824 CCDC196A0A1B0GTZ2 297 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 PLEKHA8P1O95397 391 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 CNGA1P29973 690 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 METAP2P50579 478 aaKnown RBP eCLIP18.66■□□□□ 0.58
CSHL1-204ENST00000392824 CNTN2Q02246 1040 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 SLC35G1Q2M3R5 365 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 RNF207Q6ZRF8 634 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 TMTC3Q6ZXV5 915 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 ZNF467Q7Z7K2 595 aaPredicted RBP18.66■□□□□ 0.58
CSHL1-204ENST00000392824 CMTR1Q8N1G2 835 aaKnown RBP18.66■□□□□ 0.58
CSHL1-204ENST00000392824 RGS22Q8NE09 1264 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 AGXT2Q9BYV1 514 aa18.66■□□□□ 0.58
CSHL1-204ENST00000392824 POTEFA5A3E0 1075 aa18.65■□□□□ 0.58
CSHL1-204ENST00000392824 CALML3P27482 149 aa18.65■□□□□ 0.58
CSHL1-204ENST00000392824 FAM133AQ8N9E0 248 aa18.65■□□□□ 0.58
CSHL1-204ENST00000392824 DEFB118Q96PH6 123 aa18.65■□□□□ 0.58
CSHL1-204ENST00000392824 MAF1Q9H063 256 aa18.65■□□□□ 0.58
CSHL1-204ENST00000392824 UPF2Q9HAU5 1272 aaKnown RBP18.65■□□□□ 0.58
CSHL1-204ENST00000392824 CNPY2Q9Y2B0 182 aa18.65■□□□□ 0.58
CSHL1-204ENST00000392824 ASB14A6NK59 587 aa18.64■□□□□ 0.57
CSHL1-204ENST00000392824 IGHA2P01877 340 aa18.64■□□□□ 0.57
CSHL1-204ENST00000392824 TFRCP02786 760 aaKnown RBP18.64■□□□□ 0.57
CSHL1-204ENST00000392824 U2AF1L4Q8WU68 220 aaKnown RBP18.64■□□□□ 0.57
CSHL1-204ENST00000392824 PAK6Q9NQU5 681 aaPredicted RBP18.64■□□□□ 0.57
CSHL1-204ENST00000392824 ADD3Q9UEY8 706 aaKnown RBP18.64■□□□□ 0.57
CSHL1-204ENST00000392824 NRBP1Q9UHY1 535 aa18.64■□□□□ 0.57
CSHL1-204ENST00000392824 PLXNB2O15031 1838 aa18.64■□□□□ 0.57
CSHL1-204ENST00000392824 PPP1R11O60927 126 aaPredicted RBP18.63■□□□□ 0.57
CSHL1-204ENST00000392824 SGPL1O95470 568 aa18.63■□□□□ 0.57
CSHL1-204ENST00000392824 CAPN2P17655 700 aa18.63■□□□□ 0.57
CSHL1-204ENST00000392824 EN2P19622 333 aaPredicted RBP18.63■□□□□ 0.57
CSHL1-204ENST00000392824 CCND3P30281 292 aaPredicted RBP18.63■□□□□ 0.57
CSHL1-204ENST00000392824 GJA8P48165 433 aa18.63■□□□□ 0.57
CSHL1-204ENST00000392824 RPS6P62753 249 aaKnown RBP18.63■□□□□ 0.57
CSHL1-204ENST00000392824 TOB2Q14106 344 aaPredicted RBP18.63■□□□□ 0.57
CSHL1-204ENST00000392824 PRAMEF19Q5SWL8 479 aa18.63■□□□□ 0.57
CSHL1-204ENST00000392824 MAMDC4Q6UXC1 1216 aa18.63■□□□□ 0.57
CSHL1-204ENST00000392824 MPHOSPH6Q99547 160 aaKnown RBP18.63■□□□□ 0.57
CSHL1-204ENST00000392824 SYNGAP1Q96PV0 1343 aa18.63■□□□□ 0.57
CSHL1-204ENST00000392824 SOWAHBA6NEL2 793 aa18.62■□□□□ 0.57
CSHL1-204ENST00000392824 B4DLN1 442 aa18.62■□□□□ 0.57
CSHL1-204ENST00000392824 CFBP00751 764 aa18.62■□□□□ 0.57
CSHL1-204ENST00000392824 CYBAP13498 195 aa18.62■□□□□ 0.57
CSHL1-204ENST00000392824 PDIA3P30101 505 aaKnown RBP18.62■□□□□ 0.57
CSHL1-204ENST00000392824 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
CSHL1-204ENST00000392824 MRPL12P52815 198 aaKnown RBP18.62■□□□□ 0.57
CSHL1-204ENST00000392824 EVCP57679 992 aa18.62■□□□□ 0.57
CSHL1-204ENST00000392824 ANKRD1Q15327 319 aa18.62■□□□□ 0.57
CSHL1-204ENST00000392824 SLC30A10Q6XR72 485 aa18.62■□□□□ 0.57
CSHL1-204ENST00000392824 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.62■□□□□ 0.57
CSHL1-204ENST00000392824 ZNF236Q9UL36 1845 aa18.62■□□□□ 0.57
CSHL1-204ENST00000392824 KIAA0100Q14667 2235 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms