RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 MTA3Q9BTC8 594 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 RTFDC1Q9BY42 306 aaPredicted RBP12.16□□□□□ -0.46
BRF1-204ENST00000392557 TSPYL1Q9H0U9 437 aa12.16□□□□□ -0.46
BRF1-204ENST00000392557 ZNHIT6Q9NWK9 470 aaKnown RBP12.16□□□□□ -0.46
BRF1-204ENST00000392557 ADD3Q9UEY8 706 aaKnown RBP12.16□□□□□ -0.46
BRF1-204ENST00000392557 MACROD2A1Z1Q3 448 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 MYO1CO00159 1063 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
BRF1-204ENST00000392557 SCG2P13521 617 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 ACTN2P35609 894 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
BRF1-204ENST00000392557 SBK1Q52WX2 424 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 RCSD1Q6JBY9 416 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 GOLGA5Q8TBA6 731 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 EXOC4Q96A65 974 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 EYA3Q99504 573 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 CHP1Q99653 195 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 DBNDD1Q9H9R9 158 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 GDAQ9Y2T3 454 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 LUC7L2Q9Y383 392 aaKnown RBP12.15□□□□□ -0.46
BRF1-204ENST00000392557 PDS5AQ29RF7 1337 aaKnown RBP12.15□□□□□ -0.46
BRF1-204ENST00000392557 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 CUL4BQ13620 913 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 PSMB7Q99436 277 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 FEZ2Q9UHY8 353 aaPredicted RBP12.15□□□□□ -0.46
BRF1-204ENST00000392557 LCMT1Q9UIC8 334 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 TAF1LQ8IZX4 1826 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 DUOX1Q9NRD9 1551 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 IRS2Q9Y4H2 1338 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 FUT2Q10981 343 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 CLEC10AQ8IUN9 316 aa12.15□□□□□ -0.46
BRF1-204ENST00000392557 TRIM49BA6NDI0 452 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 ADAMTS3O15072 1205 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 KCNA4P22459 653 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 CDK8P49336 464 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 COPB1P53618 953 aaKnown RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 MRPS25P82663 173 aaKnown RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 GSDMAQ96QA5 445 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 PHF20Q9BVI0 1012 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 FAM204AQ9H8W3 233 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 ABHD10Q9NUJ1 306 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 SLURP2P0DP57 97 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 SARSP49591 514 aaKnown RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 DNAJC21Q5F1R6 531 aaKnown RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 BEND6Q5SZJ8 279 aaPredicted RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 GSPT2Q8IYD1 628 aaKnown RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 RRP15Q9Y3B9 282 aaKnown RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 EPN1Q9Y6I3 576 aaPredicted RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 TIAM2Q8IVF5 1701 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 MPHOSPH10O00566 681 aaKnown RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 RCAN1P53805 252 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 CCDC70Q6NSX1 233 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 USP17L2Q6R6M4 530 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
BRF1-204ENST00000392557 TMEM47Q9BQJ4 181 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 FLT1P17948 1338 aa12.14□□□□□ -0.47
BRF1-204ENST00000392557 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 FGRP09769 529 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 CACNB3P54284 484 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 ERVK-24P63145 666 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 SPAG1Q07617 926 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 STIM1Q13586 685 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 A0A1B0GUL6 1792 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 RASA1P20936 1047 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 UBA7P41226 1012 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 DEF6Q9H4E7 631 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 SBF2Q86WG5 1849 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 MYH6P13533 1939 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 IVLP07476 585 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 MTIF2P46199 727 aaKnown RBP12.13□□□□□ -0.47
BRF1-204ENST00000392557 TCP10Q12799 353 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 KIAA0825Q8IV33 1275 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 SLF2Q8IX21 1173 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 RIN2Q8WYP3 895 aaPredicted RBP12.13□□□□□ -0.47
BRF1-204ENST00000392557 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 ZNF287Q9HBT7 754 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
BRF1-204ENST00000392557 COL24A1Q17RW2 1714 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 IL1R1P14778 569 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 WHAMMP3Q1A5X7 153 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 LRRC47Q8N1G4 583 aaKnown RBP12.12□□□□□ -0.47
BRF1-204ENST00000392557 CRAMP1Q96RY5 1269 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 MKRN1Q9UHC7 482 aaKnown RBP12.12□□□□□ -0.47
BRF1-204ENST00000392557 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
BRF1-204ENST00000392557 CCDC194A0A1B0GVG4 234 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 PPP1R3GB7ZBB8 358 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 RNF225M0QZC1 329 aaPredicted RBP12.12□□□□□ -0.47
BRF1-204ENST00000392557 PPARDQ03181 441 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 DPYDQ12882 1025 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 CCDC96Q2M329 555 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 MAP9Q49MG5 647 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 FOXR1Q6PIV2 292 aa12.12□□□□□ -0.47
BRF1-204ENST00000392557 ZSCAN29Q8IWY8 852 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms