RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 CDKL5O76039 1030 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 AKAP17AQ02040 695 aaKnown RBP17.26■□□□□ 0.35
SUMO1-203ENST00000392246 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 ACAD9Q9H845 621 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 RBM27Q9P2N5 1060 aaKnown RBP17.26■□□□□ 0.35
SUMO1-203ENST00000392246 PCDHA1Q9Y5I3 950 aa17.26■□□□□ 0.35
SUMO1-203ENST00000392246 PLXNB2O15031 1838 aa17.25■□□□□ 0.35
SUMO1-203ENST00000392246 PRPF3O43395 683 aaKnown RBP17.25■□□□□ 0.35
SUMO1-203ENST00000392246 PPP1R11O60927 126 aaPredicted RBP17.25■□□□□ 0.35
SUMO1-203ENST00000392246 FCER1AP12319 257 aa17.25■□□□□ 0.35
SUMO1-203ENST00000392246 PTPREP23469 700 aa17.25■□□□□ 0.35
SUMO1-203ENST00000392246 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.25■□□□□ 0.35
SUMO1-203ENST00000392246 TRIM22Q8IYM9 498 aa17.25■□□□□ 0.35
SUMO1-203ENST00000392246 ABRAQ8N0Z2 381 aa17.25■□□□□ 0.35
SUMO1-203ENST00000392246 PHKBQ93100 1093 aa17.25■□□□□ 0.35
SUMO1-203ENST00000392246 RNF26Q9BY78 433 aaPredicted RBP17.25■□□□□ 0.35
SUMO1-203ENST00000392246 MRPL11Q9Y3B7 192 aaKnown RBP17.25■□□□□ 0.35
SUMO1-203ENST00000392246 TRIM17Q9Y577 477 aa17.25■□□□□ 0.35
SUMO1-203ENST00000392246 hCG_1642624A0A1W2PR95 340 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 SLC15A5A6NIM6 579 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 CD2BP2O95400 341 aaKnown RBP17.24■□□□□ 0.35
SUMO1-203ENST00000392246 TAL1P17542 331 aaPredicted RBP17.24■□□□□ 0.35
SUMO1-203ENST00000392246 PRMT2P55345 433 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
SUMO1-203ENST00000392246 GRB14Q14449 540 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 KCTD2Q14681 263 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 MUM1L1Q5H9M0 696 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 OTOP1Q7RTM1 612 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 SOCS4Q8WXH5 440 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 MMP19Q99542 508 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 NUDT12Q9BQG2 462 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 SLC26A6Q9BXS9 759 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 SRRDQ9UH36 339 aa17.24■□□□□ 0.35
SUMO1-203ENST00000392246 MORN1Q5T089 497 aa17.23■□□□□ 0.35
SUMO1-203ENST00000392246 CTU1Q7Z7A3 348 aaKnown RBP17.23■□□□□ 0.35
SUMO1-203ENST00000392246 ANKRD35Q8N283 1001 aa17.23■□□□□ 0.35
SUMO1-203ENST00000392246 CLEC4DQ8WXI8 215 aa17.23■□□□□ 0.35
SUMO1-203ENST00000392246 GJD2Q9UKL4 321 aa17.23■□□□□ 0.35
SUMO1-203ENST00000392246 ADORA2AP29274 412 aa17.22■□□□□ 0.35
SUMO1-203ENST00000392246 PRKCZQ05513 592 aa17.22■□□□□ 0.35
SUMO1-203ENST00000392246 PFKFB3Q16875 520 aaPredicted RBP17.22■□□□□ 0.35
SUMO1-203ENST00000392246 DDX11Q96FC9 970 aa17.22■□□□□ 0.35
SUMO1-203ENST00000392246 TMX3Q96JJ7 454 aa17.22■□□□□ 0.35
SUMO1-203ENST00000392246 MAF1Q9H063 256 aa17.22■□□□□ 0.35
SUMO1-203ENST00000392246 GABRQQ9UN88 632 aa17.22■□□□□ 0.35
SUMO1-203ENST00000392246 hCG_1984214I3L0E3 225 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 NFIBO00712 420 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 PPFIA3O75145 1194 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 CTDNEP1O95476 244 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 SCG2P13521 617 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 RGS2P41220 211 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 FLT3LGP49771 235 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 MAP2K5Q13163 448 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 MCF2L2Q86YR7 1114 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 CCDC83Q8IWF9 413 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 ZNF713Q8N859 430 aaPredicted RBP17.21■□□□□ 0.35
SUMO1-203ENST00000392246 RGS22Q8NE09 1264 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 SLC5A4Q9NY91 659 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 PFASO15067 1338 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
SUMO1-203ENST00000392246 DEXIO95424 95 aa17.21■□□□□ 0.34
SUMO1-203ENST00000392246 ST3GAL1Q11201 340 aa17.21■□□□□ 0.34
SUMO1-203ENST00000392246 PKN1Q16512 942 aa17.21■□□□□ 0.34
SUMO1-203ENST00000392246 PKN2Q16513 984 aaKnown RBP17.21■□□□□ 0.34
SUMO1-203ENST00000392246 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.34
SUMO1-203ENST00000392246 NSMFQ6X4W1 530 aa17.21■□□□□ 0.34
SUMO1-203ENST00000392246 DPP9Q86TI2 863 aa17.21■□□□□ 0.34
SUMO1-203ENST00000392246 USP6NLQ92738 828 aa17.21■□□□□ 0.34
SUMO1-203ENST00000392246 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.34
SUMO1-203ENST00000392246 LLPHQ9BRT6 129 aaKnown RBP17.21■□□□□ 0.34
SUMO1-203ENST00000392246 A1CFQ9NQ94 594 aaKnown RBP17.21■□□□□ 0.34
SUMO1-203ENST00000392246 STK36Q9NRP7 1315 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 IRF5Q13568 498 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 RNF207Q6ZRF8 634 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 SAMD3Q8N6K7 520 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
SUMO1-203ENST00000392246 RAET1EQ8TD07 263 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 SNX21Q969T3 373 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 BARHL2Q9NY43 387 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 CYP39A1Q9NYL5 469 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 PTPN22Q9Y2R2 807 aa17.2■□□□□ 0.34
SUMO1-203ENST00000392246 PLXNA1Q9UIW2 1896 aa17.19■□□□□ 0.34
SUMO1-203ENST00000392246 PTPDC1A2A3K4 754 aa17.19■□□□□ 0.34
SUMO1-203ENST00000392246 COBLO75128 1261 aa17.19■□□□□ 0.34
SUMO1-203ENST00000392246 HOXC6P09630 235 aa17.19■□□□□ 0.34
SUMO1-203ENST00000392246 XRCC5P13010 732 aaKnown RBP17.19■□□□□ 0.34
SUMO1-203ENST00000392246 CYP2B6P20813 491 aa17.19■□□□□ 0.34
SUMO1-203ENST00000392246 BAATQ14032 418 aaPredicted RBP17.19■□□□□ 0.34
SUMO1-203ENST00000392246 MAP3K20Q9NYL2 800 aaKnown RBP17.19■□□□□ 0.34
SUMO1-203ENST00000392246 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
SUMO1-203ENST00000392246 RBBP6Q7Z6E9 1792 aaKnown RBP17.19■□□□□ 0.34
SUMO1-203ENST00000392246 DNAJC25-GNG10A0A024R161 153 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 STXBP3O00186 592 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 OPLAHO14841 1288 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 PGK2P07205 417 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 NAPAP54920 295 aa17.18■□□□□ 0.34
SUMO1-203ENST00000392246 RPS6P62753 249 aaKnown RBP17.18■□□□□ 0.34
SUMO1-203ENST00000392246 PPP1R18Q6NYC8 613 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms