RNA–Protein interactions for RNA: ENST00000391975.5

HDLBP-203, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 6,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-203ENST00000391975 MMP1P03956 469 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 CASP1P29466 404 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 VSNL1P62760 191 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 KRT31Q15323 416 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-203ENST00000391975 WDR46O15213 610 aaKnown RBP12.72□□□□□ -0.37
HDLBP-203ENST00000391975 IFNAR1P17181 557 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 E2F5Q15329 346 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 ARHGEF25Q86VW2 580 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 VSIG1Q86XK7 387 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 FOXN1O15353 648 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-203ENST00000391975 EHHADHQ08426 723 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 PDCLQ13371 301 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 NNTQ13423 1086 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 NONOQ15233 471 aaKnown RBP eCLIP12.72□□□□□ -0.371e-6■■■■■ 33.1
HDLBP-203ENST00000391975 TSGA10IPQ3SY00 556 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 CCDC89Q8N998 374 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 EPB41L5Q9HCM4 733 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 TBC1D7Q9P0N9 293 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 PREX2Q70Z35 1606 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 SH2B2O14492 632 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-203ENST00000391975 IGKV5-2P06315 115 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 APBA1Q02410 837 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 TRIM4Q9C037 500 aa12.72□□□□□ -0.37
HDLBP-203ENST00000391975 FAM170AA1A519 330 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 FRMD3A2A2Y4 597 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 PFDN1O60925 122 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 CNBD1Q8NA66 436 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 SNX29Q8TEQ0 813 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 MRRFQ96E11 262 aaKnown RBP12.71□□□□□ -0.37
HDLBP-203ENST00000391975 ZC4H2Q9NQZ6 224 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 RASSF7Q02833 373 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 HERC4Q5GLZ8 1057 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-203ENST00000391975 FAM47AQ5JRC9 791 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 GSPT2Q8IYD1 628 aaKnown RBP12.71□□□□□ -0.37
HDLBP-203ENST00000391975 KRT12Q99456 494 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-203ENST00000391975 MED23Q9ULK4 1368 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 GGCXP38435 758 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 MAP3K7CLP57077 242 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 SLC7A5Q01650 507 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 UBE3CQ15386 1083 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 IQCDQ96DY2 449 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 SRPRBQ9Y5M8 271 aaKnown RBP12.71□□□□□ -0.37
HDLBP-203ENST00000391975 FHOD1Q9Y613 1164 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 REREQ9P2R6 1566 aa12.71□□□□□ -0.37
HDLBP-203ENST00000391975 CHGBP05060 677 aa12.71□□□□□ -0.38
HDLBP-203ENST00000391975 CLTAP09496 248 aa12.71□□□□□ -0.38
HDLBP-203ENST00000391975 H2AFXP16104 143 aaPredicted RBP12.71□□□□□ -0.38
HDLBP-203ENST00000391975 DPH5Q9H2P9 285 aa12.71□□□□□ -0.38
HDLBP-203ENST00000391975 PTPREP23469 700 aa12.71□□□□□ -0.38
HDLBP-203ENST00000391975 EEF1GP26641 437 aaKnown RBP12.71□□□□□ -0.38
HDLBP-203ENST00000391975 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.38
HDLBP-203ENST00000391975 TBC1D31Q96DN5 1066 aa12.71□□□□□ -0.38
HDLBP-203ENST00000391975 BCAP29Q9UHQ4 241 aa12.71□□□□□ -0.38
HDLBP-203ENST00000391975 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 SNCBQ16143 134 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 FAM182BQ5T319 152 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 SHC4Q6S5L8 630 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 TAOK1Q7L7X3 1001 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 HS2ST1Q7LGA3 356 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 SDR42E1Q8WUS8 393 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 CNOT6LQ96LI5 555 aaKnown RBP12.7□□□□□ -0.38
HDLBP-203ENST00000391975 KIF28PB7ZC32 967 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 IRX4P78413 519 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 LARGE2Q8N3Y3 721 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 PAGE5Q96GU1 130 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 HAUS8Q9BT25 410 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 AGTPBP1Q9UPW5 1226 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 PHKA1P46020 1223 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 TRIM68Q6AZZ1 485 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 FNBP4Q8N3X1 1017 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-203ENST00000391975 FRMD4BQ9Y2L6 1034 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 UNC13BO14795 1591 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 USP6P35125 1406 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 I3L4J1 428 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 GIPC1O14908 333 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 LTKP29376 864 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 RPAINQ86UA6 219 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 BLIDQ8IZY5 108 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 SLC39A2Q9NP94 309 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-203ENST00000391975 PDE8AO60658 829 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 FLOT1O75955 427 aa12.7□□□□□ -0.38
HDLBP-203ENST00000391975 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
HDLBP-203ENST00000391975 ZSCAN10Q96SZ4 725 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-203ENST00000391975 KRIT1O00522 736 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 DNAJC10Q8IXB1 793 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 CDC42BPAQ5VT25 1732 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 USP17L12C9JPN9 530 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 USP17L21D6R901 530 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 RPSAP08865 295 aaKnown RBP12.69□□□□□ -0.38
HDLBP-203ENST00000391975 HHATQ5VTY9 493 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 EYA3Q99504 573 aa12.69□□□□□ -0.38
HDLBP-203ENST00000391975 NUCKS1Q9H1E3 243 aaKnown RBP12.69□□□□□ -0.38
HDLBP-203ENST00000391975 RGS16O15492 202 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-203ENST00000391975 UHMK1Q8TAS1 419 aaKnown RBP12.69□□□□□ -0.38
HDLBP-203ENST00000391975 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms