RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 PRDX5P30044 214 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 PAPD7Q5XG87 772 aaKnown RBP20.12■□□□□ 0.81
ERCC2-201ENST00000391941 TTI2Q6NXR4 508 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 SLC44A5Q8NCS7 719 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 RBM28Q9NW13 759 aaKnown RBP20.12■□□□□ 0.81
ERCC2-201ENST00000391941 GOLGA6AQ9NYA3 693 aa20.12■□□□□ 0.81
ERCC2-201ENST00000391941 USP17L3A6NCW0 530 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 USP17L4A6NCW7 530 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 TUBBP07437 444 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 UBA7P41226 1012 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 MAGEA9P43362 315 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 USP17L1Q7RTZ2 530 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 DNAAF5Q86Y56 855 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 KRT86O43790 486 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 CORO7P57737 925 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 TRADDQ15628 312 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 BLIDQ8IZY5 108 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 GLIS3Q8NEA6 775 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 EXOC1Q9NV70 894 aa20.11■□□□□ 0.81
ERCC2-201ENST00000391941 EXOC5O00471 708 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 PLCG1P19174 1290 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 PDE4DQ08499 809 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 DTHD1Q6ZMT9 781 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 KAT2BQ92831 832 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 NOC4LQ9BVI4 516 aaKnown RBP20.1■□□□□ 0.81
ERCC2-201ENST00000391941 ACBD3Q9H3P7 528 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 BTG4Q9NY30 223 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 PDS5AQ29RF7 1337 aaKnown RBP20.1■□□□□ 0.81
ERCC2-201ENST00000391941 PPFIA4O75335 1185 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 RPS6KA5O75582 802 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 PFKFB3Q16875 520 aaPredicted RBP20.1■□□□□ 0.81
ERCC2-201ENST00000391941 FBXW10Q5XX13 1052 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 CREG2Q8IUH2 290 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 RMND1Q9NWS8 449 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 LRP5O75197 1615 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 DCCP43146 1447 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 BCORQ6W2J9 1755 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 TAF1P21675 1872 aa20.1■□□□□ 0.81
ERCC2-201ENST00000391941 ERVV-1B6SEH8 477 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 KRT14P02533 472 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 AARSP49588 968 aaKnown RBP eCLIP20.09■□□□□ 0.81
ERCC2-201ENST00000391941 IRAK1P51617 712 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 ASIC1P78348 528 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 MYH10P35580 1976 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 TXNRD1Q16881 649 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 FAM76AQ8TAV0 307 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 SECISBP2LQ93073 1101 aaKnown RBP20.09■□□□□ 0.81
ERCC2-201ENST00000391941 TTYH3Q9C0H2 523 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 PACSIN2Q9UNF0 486 aaPredicted RBP20.09■□□□□ 0.81
ERCC2-201ENST00000391941 CCDC194A0A1B0GVG4 234 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 PSMA7O14818 248 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 GNGT1P63211 74 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 PDCLQ13371 301 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 MIIPQ5JXC2 388 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 RCSD1Q6JBY9 416 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 DYMQ7RTS9 669 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 BCAS4Q8TDM0 211 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 CCDC42Q96M95 316 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 MMRN2Q9H8L6 949 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 ARHGAP20Q9P2F6 1191 aa20.09■□□□□ 0.81
ERCC2-201ENST00000391941 CICQ96RK0 1608 aaPredicted RBP20.08■□□□□ 0.81
ERCC2-201ENST00000391941 IPO7O95373 1038 aaKnown RBP20.08■□□□□ 0.81
ERCC2-201ENST00000391941 SRGNP10124 158 aa20.08■□□□□ 0.81
ERCC2-201ENST00000391941 GTF2A1P52655 376 aaPredicted RBP20.08■□□□□ 0.81
ERCC2-201ENST00000391941 KIF5AQ12840 1032 aa20.08■□□□□ 0.81
ERCC2-201ENST00000391941 LETM2Q2VYF4 491 aa20.08■□□□□ 0.81
ERCC2-201ENST00000391941 GJA10Q969M2 543 aa20.08■□□□□ 0.81
ERCC2-201ENST00000391941 VAT1LQ9HCJ6 419 aa20.08■□□□□ 0.81
ERCC2-201ENST00000391941 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.8
ERCC2-201ENST00000391941 CALM1P0DP23 149 aa20.08■□□□□ 0.8
ERCC2-201ENST00000391941 CALM2P0DP24 149 aa20.08■□□□□ 0.8
ERCC2-201ENST00000391941 CALM3P0DP25 149 aa20.08■□□□□ 0.8
ERCC2-201ENST00000391941 TECP42680 631 aa20.08■□□□□ 0.8
ERCC2-201ENST00000391941 NAP1L1P55209 391 aaKnown RBP20.08■□□□□ 0.8
ERCC2-201ENST00000391941 MECOMQ03112 1051 aa20.08■□□□□ 0.8
ERCC2-201ENST00000391941 LRRC41Q15345 812 aa20.08■□□□□ 0.8
ERCC2-201ENST00000391941 ZNHIT6Q9NWK9 470 aaKnown RBP20.08■□□□□ 0.8
ERCC2-201ENST00000391941 JRKLQ9Y4A0 524 aa20.08■□□□□ 0.8
ERCC2-201ENST00000391941 ZEB2O60315 1214 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 EIF4A3P38919 411 aaKnown RBP20.07■□□□□ 0.8
ERCC2-201ENST00000391941 CCDC152Q4G0S7 254 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 IFIH1Q9BYX4 1025 aaKnown RBP20.07■□□□□ 0.8
ERCC2-201ENST00000391941 DCP1AQ9NPI6 582 aaPredicted RBP20.07■□□□□ 0.8
ERCC2-201ENST00000391941 CYTH3O43739 400 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 DDAH1O94760 285 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 KRT83P78385 493 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 TFAP4Q01664 338 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 GFPT1Q06210 699 aaPredicted RBP20.07■□□□□ 0.8
ERCC2-201ENST00000391941 VIPAS39Q9H9C1 493 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 IL17RBQ9NRM6 502 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 MCM9Q9NXL9 1143 aa20.07■□□□□ 0.8
ERCC2-201ENST00000391941 MKRN1Q9UHC7 482 aaKnown RBP20.07■□□□□ 0.8
ERCC2-201ENST00000391941 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.06■□□□□ 0.8
ERCC2-201ENST00000391941 FAM153BP0C7A2 387 aa20.06■□□□□ 0.8
ERCC2-201ENST00000391941 CYLC1P35663 651 aaPredicted RBP20.06■□□□□ 0.8
ERCC2-201ENST00000391941 TRAPPC10P48553 1259 aa20.06■□□□□ 0.8
ERCC2-201ENST00000391941 GUCY2FP51841 1108 aa20.06■□□□□ 0.8
ERCC2-201ENST00000391941 FAM153CQ494X1 144 aa20.06■□□□□ 0.8
ERCC2-201ENST00000391941 MAP9Q49MG5 647 aa20.06■□□□□ 0.8
ERCC2-201ENST00000391941 SPATA4Q8NEY3 305 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms