RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 DHTKD1Q96HY7 919 aaPredicted RBP12.14□□□□□ -0.47
NLRP3-205ENST00000391827 C7orf25Q9BPX7 421 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 CARD6Q9BX69 1037 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 CALCOCO1Q9P1Z2 691 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 IGKV6D-41A0A0C4DH26 115 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 PP2D1A8MPX8 630 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 LGALS16A8MUM7 142 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 PSMA7O14818 248 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 SNHG28P0DPA3 235 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 CYP26C1Q6V0L0 522 aa12.14□□□□□ -0.47
NLRP3-205ENST00000391827 RSRC2Q7L4I2 434 aaKnown RBP12.14□□□□□ -0.47
NLRP3-205ENST00000391827 ARGLU1Q9NWB6 273 aaPredicted RBP12.14□□□□□ -0.47
NLRP3-205ENST00000391827 CLCN6P51797 869 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 MAPK8IP2Q13387 824 aaPredicted RBP12.13□□□□□ -0.47
NLRP3-205ENST00000391827 ASPRV1Q53RT3 343 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 CABP7Q86V35 215 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 ZNF507Q8TCN5 953 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 LRRC15Q8TF66 581 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 TAB2Q9NYJ8 693 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 TULP2O00295 520 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 PDHBP11177 359 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
NLRP3-205ENST00000391827 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 SP8Q8IXZ3 490 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 VPS16Q9H269 839 aa12.13□□□□□ -0.47
NLRP3-205ENST00000391827 POLRMTO00411 1230 aaKnown RBP12.12□□□□□ -0.47
NLRP3-205ENST00000391827 KIF5CO60282 957 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 ZRANB2O95218 330 aaKnown RBP eCLIP12.12□□□□□ -0.47
NLRP3-205ENST00000391827 PLCG1P19174 1290 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 ERVK-24P63145 666 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 PPP2R3AQ06190 1150 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 BMS1Q14692 1282 aaKnown RBP12.12□□□□□ -0.47
NLRP3-205ENST00000391827 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 REXO1Q8N1G1 1221 aaKnown RBP12.12□□□□□ -0.47
NLRP3-205ENST00000391827 GPR161Q8N6U8 529 aaKnown RBP12.12□□□□□ -0.47
NLRP3-205ENST00000391827 MB21D1Q8N884 522 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 RASSF8Q8NHQ8 419 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 CPLX3Q8WVH0 158 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 TRIM9Q9C026 710 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 COA1Q9GZY4 146 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 MTMR4Q9NYA4 1195 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 ATP8B1O43520 1251 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 CCNT1O60563 726 aaKnown RBP12.12□□□□□ -0.47
NLRP3-205ENST00000391827 PMS1P54277 932 aaKnown RBP12.12□□□□□ -0.47
NLRP3-205ENST00000391827 DDR1Q08345 913 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 CCDC47Q96A33 483 aaKnown RBP12.12□□□□□ -0.47
NLRP3-205ENST00000391827 MTMR9Q96QG7 549 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 PIGSQ96S52 555 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 DNAJC7Q99615 494 aa12.12□□□□□ -0.47
NLRP3-205ENST00000391827 GREB1LQ9C091 1923 aaPredicted RBP12.11□□□□□ -0.47
NLRP3-205ENST00000391827 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.47
NLRP3-205ENST00000391827 TUBB4BP68371 445 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 AMPD3Q01432 767 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 LETM2Q2VYF4 491 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 RABGGTAQ92696 567 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 YY1AP1Q9H869 796 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 SWAP70Q9UH65 585 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 TRIM49BA6NDI0 452 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 COBLO75128 1261 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 CCNE1P24864 410 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
NLRP3-205ENST00000391827 UBXN1Q04323 297 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 TBCKQ8TEA7 893 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
NLRP3-205ENST00000391827 DUSP9Q99956 384 aaKnown RBP12.11□□□□□ -0.47
NLRP3-205ENST00000391827 MMTAG2Q9BU76 263 aaKnown RBP12.11□□□□□ -0.47
NLRP3-205ENST00000391827 CPVLQ9H3G5 476 aa12.11□□□□□ -0.47
NLRP3-205ENST00000391827 RNF225M0QZC1 329 aaPredicted RBP12.1□□□□□ -0.47
NLRP3-205ENST00000391827 DNM2P50570 870 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 CNNM4Q6P4Q7 775 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 SEPT12Q8IYM1 358 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 STK17AQ9UEE5 414 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 CAPN11Q9UMQ6 739 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 MAPK8IP1Q9UQF2 711 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 FHOD1Q9Y613 1164 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 PPEF1O14829 653 aaPredicted RBP12.1□□□□□ -0.47
NLRP3-205ENST00000391827 SRGNP10124 158 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 KRT9P35527 623 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 MMP14P50281 582 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 FAM193AP78312 1265 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 ZNF662Q6ZS27 426 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 FAM114A1Q8IWE2 563 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 P2RX5Q93086 422 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 TRIM47Q96LD4 638 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 LZTFL1Q9NQ48 299 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
NLRP3-205ENST00000391827 MTMR7Q9Y216 660 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 ANKRD31Q8N7Z5 1873 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 ARHGAP25P42331 645 aa12.1□□□□□ -0.47
NLRP3-205ENST00000391827 TMCO3Q6UWJ1 677 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms