RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 NKX2-4Q9H2Z4 354 aa4.72□□□□□ -1.65
RNU6-550P-201ENST00000391057 SP110Q9HB58 689 aa4.72□□□□□ -1.65
RNU6-550P-201ENST00000391057 CYP26B1Q9NR63 512 aa4.72□□□□□ -1.65
RNU6-550P-201ENST00000391057 SNTG2Q9NY99 539 aa4.72□□□□□ -1.65
RNU6-550P-201ENST00000391057 A0A1W2PQ27 194 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 A0A1W2PQ64 194 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 A0A1W2PQC6 194 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 A0A1W2PQD8 194 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 A0A1W2PQU0 124 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 PSPNO60542 156 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 PAMP19021 973 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 KCNJ6P48051 423 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 PPP2R2AP63151 447 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 LAPTM5Q13571 262 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 HSP90AA2PQ14568 343 aaPredicted RBP4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 RASA3Q14644 834 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 SNX17Q15036 470 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 LRP10Q7Z4F1 713 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 TMEM52Q8NDY8 209 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 JMJD8Q96S16 334 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 AARSD1Q9BTE6 412 aaKnown RBP4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 CWC22Q9HCG8 908 aaKnown RBP4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 CLEC1BQ9P126 229 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 USP35Q9P2H5 1018 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 PFDN2Q9UHV9 154 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 CARMIL2Q6F5E8 1435 aa4.71□□□□□ -1.66
RNU6-550P-201ENST00000391057 NPHP3-ACAD11A0A0J9YXS1 232 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 NOTOA8MTQ0 251 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 THBDP07204 575 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 HOXC12P31275 282 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 L1CAMP32004 1257 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 ECI1P42126 302 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 CEBPAP49715 358 aaPredicted RBP4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 SSRP1Q08945 709 aaKnown RBP4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 NFE2L2Q16236 605 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 MPZL3Q6UWV2 235 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 SPATC1Q76KD6 591 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 NLRX1Q86UT6 975 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 NUP43Q8NFH3 380 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 COPS5Q92905 334 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 CCDC140Q96MF4 163 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 PLCD4Q9BRC7 762 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 SPATA9Q9BWV2 254 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 SLC6A17Q9H1V8 727 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 GPRC5CQ9NQ84 441 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 IMPACTQ9P2X3 320 aa4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 YBX2Q9Y2T7 364 aaKnown RBP4.7□□□□□ -1.66
RNU6-550P-201ENST00000391057 TRAV20A0A0B4J274 112 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 FAM221BA6H8Z2 402 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 PAX4O43316 350 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 CPP00450 1065 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 SCG5P05408 212 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 PLS3P13797 630 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 PRKCAP17252 672 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 GALK1P51570 392 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 GFRA1P56159 465 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 RBM10P98175 930 aaKnown RBP4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 BMS1Q14692 1282 aaKnown RBP4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 SIRT2Q8IXJ6 389 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 KCTD13Q8WZ19 329 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 MRFAP1L1Q96HT8 127 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 INTS4Q96HW7 963 aaKnown RBP4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 IER2Q9BTL4 223 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 LNPKQ9C0E8 428 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 CRTAC1Q9NQ79 661 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 ARHGEF4Q9NR80 690 aa4.69□□□□□ -1.66
RNU6-550P-201ENST00000391057 ZNF503-AS2A6NEH8 195 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 MEFVO15553 781 aaPredicted RBP4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 PRODHO43272 600 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 PNLIPP16233 465 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 PDE6BP35913 854 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 ARL4AP40617 200 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 GRIA2P42262 883 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 CORO7P57737 925 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 CYP4F8P98187 520 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 MAP4K2Q12851 820 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 KCNAB2Q13303 367 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 SF1Q15637 639 aaKnown RBP4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 PRSS53Q2L4Q9 553 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 E4F1Q66K89 784 aaPredicted RBP4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 IQCEQ6IPM2 695 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 CPNE8Q86YQ8 564 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 PPIL6Q8IXY8 311 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 TMEM145Q8NBT3 493 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 NPLOC4Q8TAT6 608 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 FRS2Q8WU20 508 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 SHISA4Q96DD7 197 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 LIN37Q96GY3 246 aaPredicted RBP4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 MMP19Q99542 508 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 ZSWIM4Q9H7M6 989 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 FAM53CQ9NYF3 392 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 ACSL6Q9UKU0 697 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 CDK11AQ9UQ88 783 aaPredicted RBP4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 KDM2BQ8NHM5 1336 aa4.68□□□□□ -1.66
RNU6-550P-201ENST00000391057 A0A1W2PQJ5 194 aa4.67□□□□□ -1.66
RNU6-550P-201ENST00000391057 LRRC10BA6NIK2 292 aa4.67□□□□□ -1.66
RNU6-550P-201ENST00000391057 NPHS1O60500 1241 aa4.67□□□□□ -1.66
RNU6-550P-201ENST00000391057 DIAPH1O60610 1272 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms