RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 TLE2Q04725 743 aa15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 CCSAPQ6IQ19 270 aaPredicted RBP15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 RUFY2Q8WXA3 655 aa15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 FGD4Q96M96 766 aa15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 MTMR7Q9Y216 660 aa15.97■□□□□ 0.15
TRBV4-1-201ENST00000390357 MCM3APO60318 1980 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 SOWAHBA6NEL2 793 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 SOX1O00570 391 aaPredicted RBP15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 ZEB2O60315 1214 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 CABYRO75952 493 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 CLTBP09497 229 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 C6orf222P0C671 652 aaPredicted RBP15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 TNFAIP2Q03169 654 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 ZNF543Q08ER8 600 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 GNASQ5JWF2 1037 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 TTBK2Q6IQ55 1244 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 RGS22Q8NE09 1264 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 MORC4Q8TE76 937 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 KATNBL1Q9H079 304 aa15.96■□□□□ 0.15
TRBV4-1-201ENST00000390357 WDR19Q8NEZ3 1342 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 KIAA0355O15063 1070 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 ASGR1P07306 291 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 SLC16A2P36021 539 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 MUM1L1Q5H9M0 696 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 FAM109BQ6ICB4 259 aaPredicted RBP15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 CHMP4CQ96CF2 233 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 LRCH3Q96II8 777 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 KAT14Q9H8E8 782 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 VTA1Q9NP79 307 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 GPCPD1Q9NPB8 672 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 PRDM5Q9NQX1 630 aaPredicted RBP15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 PDLIM7Q9NR12 457 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 ZSWIM5Q9P217 1185 aa15.95■□□□□ 0.14
TRBV4-1-201ENST00000390357 RAG1P15918 1043 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 CDK7P50613 346 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 NSMFQ6X4W1 530 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 TBC1D10CQ8IV04 446 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 DNERQ8NFT8 737 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 BADQ92934 168 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 VTI1AQ96AJ9 217 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 ZSCAN10Q96SZ4 725 aaPredicted RBP15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 AP5M1Q9H0R1 490 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 TMEM39AQ9NV64 488 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 GNEQ9Y223 722 aaKnown RBP15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 RANBP2P49792 3224 aaKnown RBP15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 FRMPD2Q68DX3 1309 aaPredicted RBP15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 RAD50Q92878 1312 aa15.94■□□□□ 0.14
TRBV4-1-201ENST00000390357 A0A0U1RQG5 324 aaPredicted RBP15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 ARVCFO00192 962 aa15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 TLR3O15455 904 aaKnown RBP15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 KDM4AO75164 1064 aa15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 SNAP25P60880 206 aa15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 BAATQ14032 418 aaPredicted RBP15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 RNF207Q6ZRF8 634 aa15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 NOL8Q76FK4 1167 aaKnown RBP15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 PNMA1Q8ND90 353 aa15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 LTBP2Q14767 1821 aa15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 LAMA4Q16363 1823 aa15.93■□□□□ 0.14
TRBV4-1-201ENST00000390357 TRIM43BA6NCK2 446 aa15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 PQBP1O60828 265 aaKnown RBP15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 FAAP100Q0VG06 881 aa15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 TRDNQ13061 729 aa15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 ASPRV1Q53RT3 343 aa15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 TAPT1Q6NXT6 567 aa15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 DEFB123Q8N688 67 aa15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 TRIM43Q96BQ3 446 aaPredicted RBP15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 UBAC1Q9BSL1 405 aa15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 DNAH12Q6ZR08 3092 aa15.92■□□□□ 0.14
TRBV4-1-201ENST00000390357 PTPDC1A2A3K4 754 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 B4E1Z4 1266 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 NKRFO15226 690 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 TIMP1P01033 207 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 ALDH5A1P51649 535 aaPredicted RBP15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 KIAA1211Q6ZU35 1233 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 SH3RF1Q7Z6J0 888 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 MCF2L2Q86YR7 1114 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 CLEC4DQ8WXI8 215 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 LENG1Q96BZ8 264 aaPredicted RBP15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 ZKSCAN3Q9BRR0 538 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 NEDD4P46934 1319 aa15.91■□□□□ 0.14
TRBV4-1-201ENST00000390357 RBM47A0AV96 593 aaKnown RBP15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 CTAGE5O15320 804 aa15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 DYNC1LI2O43237 492 aaPredicted RBP15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 PARP1P09874 1014 aaKnown RBP15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 TRAF1Q13077 416 aa15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 SHHQ15465 462 aa15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 FSCN1Q16658 493 aaKnown RBP15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 DUSP28Q4G0W2 176 aa15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 BRDTQ58F21 947 aaPredicted RBP15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 TLK2Q86UE8 772 aa15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 SAMD3Q8N6K7 520 aa15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 MAP3K20Q9NYL2 800 aaKnown RBP15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 ABCB11O95342 1321 aa15.9■□□□□ 0.14
TRBV4-1-201ENST00000390357 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 MYADML2A6NDP7 307 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 NFIBO00712 420 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 ADCY6O43306 1168 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 SMPD1P17405 629 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms