RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 GMCL1P1Q8NEA9 526 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 CUL5Q93034 780 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 HERC5Q9UII4 1024 aaKnown RBP20.56■□□□□ 0.88
ACTN4-202ENST00000390009 ZNRF3Q9ULT6 936 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 F5H6K3 240 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 ZNF18P17022 549 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 CLK2P49760 499 aaKnown RBP20.56■□□□□ 0.88
ACTN4-202ENST00000390009 KLRC3Q07444 240 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 UBE2SQ16763 222 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 DNTTIP2Q5QJE6 756 aaKnown RBP20.56■□□□□ 0.88
ACTN4-202ENST00000390009 NIM1KQ8IY84 436 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.56■□□□□ 0.881e-7■■■■□ 20.4
ACTN4-202ENST00000390009 PIM2Q9P1W9 311 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 R3HCC1Q9Y3T6 440 aaKnown RBP20.56■□□□□ 0.88
ACTN4-202ENST00000390009 MRPL12P52815 198 aaKnown RBP20.55■□□□□ 0.88
ACTN4-202ENST00000390009 QRICH1Q2TAL8 776 aa20.55■□□□□ 0.88
ACTN4-202ENST00000390009 HSP90AA4PQ58FG1 418 aa20.55■□□□□ 0.88
ACTN4-202ENST00000390009 SMYD4Q8IYR2 804 aaPredicted RBP20.55■□□□□ 0.88
ACTN4-202ENST00000390009 FAM151AQ8WW52 585 aa20.55■□□□□ 0.88
ACTN4-202ENST00000390009 EDIL3O43854 480 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 TNNI2P48788 182 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 SPDYE2Q495Y8 402 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 KLHL10Q6JEL2 608 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 FBXO41Q8TF61 875 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 BRCA1P38398 1863 aaKnown RBP20.54■□□□□ 0.88
ACTN4-202ENST00000390009 FER1L6Q2WGJ9 1857 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 PPP1R3GB7ZBB8 358 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 NDUFB10O96000 172 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 TGFB2P61812 414 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 CDC37Q16543 378 aaPredicted RBP20.54■□□□□ 0.88
ACTN4-202ENST00000390009 CABP7Q86V35 215 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 GMCL1Q96IK5 515 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 PSTPIP2Q9H939 334 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 SYNRGQ9UMZ2 1314 aa20.54■□□□□ 0.88
ACTN4-202ENST00000390009 TDP2O95551 362 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 RPN1P04843 607 aaKnown RBP20.53■□□□□ 0.88
ACTN4-202ENST00000390009 CDK11BP21127 795 aaKnown RBP20.53■□□□□ 0.88
ACTN4-202ENST00000390009 TECP42680 631 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 CCZ1BP86790 482 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 CCZ1P86791 482 aaPredicted RBP20.53■□□□□ 0.88
ACTN4-202ENST00000390009 AGBL3Q8NEM8 1001 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 MTMR9Q96QG7 549 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 PLIN2Q99541 437 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 SAMSN1Q9NSI8 373 aaKnown RBP20.53■□□□□ 0.88
ACTN4-202ENST00000390009 CNTNAP1P78357 1384 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 SLC37A4O43826 429 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 SKILP12757 684 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 CALCRLQ16602 461 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 IGSF22Q8N9C0 903 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 NUP88Q99567 741 aaPredicted RBP20.53■□□□□ 0.88
ACTN4-202ENST00000390009 RMND1Q9NWS8 449 aa20.53■□□□□ 0.88
ACTN4-202ENST00000390009 TXKP42681 527 aa20.52■□□□□ 0.88
ACTN4-202ENST00000390009 SPATA1Q5VX52 437 aa20.52■□□□□ 0.88
ACTN4-202ENST00000390009 CCDC150Q8NCX0 1101 aa20.52■□□□□ 0.88
ACTN4-202ENST00000390009 KBTBD4Q9NVX7 518 aa20.52■□□□□ 0.88
ACTN4-202ENST00000390009 PCDHA1Q9Y5I3 950 aa20.52■□□□□ 0.88
ACTN4-202ENST00000390009 PLCG1P19174 1290 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 STX17P56962 302 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 ZNF658Q5TYW1 1059 aaPredicted RBP20.51■□□□□ 0.87
ACTN4-202ENST00000390009 ARMCX5Q6P1M9 558 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 LRRC15Q8TF66 581 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 CUEDC2Q9H467 287 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 VEZTQ9HBM0 779 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 INTS13Q9NVM9 706 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 A0A1W2PRG0 241 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 TMEM232C9JQI7 657 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 MYL1P05976 194 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 CXCL9Q07325 125 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 PPP4R3AQ6IN85 833 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 VSTM4Q8IW00 320 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 MTMR14Q8NCE2 650 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 GLT8D2Q9H1C3 349 aa20.51■□□□□ 0.87
ACTN4-202ENST00000390009 BMP3P12645 472 aa20.5■□□□□ 0.87
ACTN4-202ENST00000390009 DHX8Q14562 1220 aaKnown RBP20.5■□□□□ 0.87
ACTN4-202ENST00000390009 DALRD3Q5D0E6 543 aaKnown RBP20.5■□□□□ 0.87
ACTN4-202ENST00000390009 FKBP1CQ5VVH2 108 aa20.5■□□□□ 0.87
ACTN4-202ENST00000390009 MAGEF1Q9HAY2 307 aa20.5■□□□□ 0.87
ACTN4-202ENST00000390009 SYNPO2Q9UMS6 1093 aa20.5■□□□□ 0.87
ACTN4-202ENST00000390009 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
ACTN4-202ENST00000390009 SFPQP23246 707 aaKnown RBP eCLIP20.5■□□□□ 0.871e-6■■■□□ 17.2
ACTN4-202ENST00000390009 FXR2P51116 673 aaKnown RBP eCLIP20.5■□□□□ 0.874e-7■■■□□ 18.2
ACTN4-202ENST00000390009 TERF1P54274 439 aa20.5■□□□□ 0.87
ACTN4-202ENST00000390009 IKQ13123 557 aaPredicted RBP20.5■□□□□ 0.87
ACTN4-202ENST00000390009 MMTAG2Q9BU76 263 aaKnown RBP20.5■□□□□ 0.87
ACTN4-202ENST00000390009 CTNND2Q9UQB3 1225 aa20.5■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L15C9J2P7 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L13C9JLJ4 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L11C9JVI0 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L18D6R9N7 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L22D6RA61 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L17D6RBQ6 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L19D6RCP7 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L20D6RJB6 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L24Q0WX57 530 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 TMEM266Q2M3C6 531 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 SYDE2Q5VT97 1194 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
ACTN4-202ENST00000390009 TAOK3Q9H2K8 898 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms