RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.51□□□□□ -0.099e-7■■■■■ 28.9
TRAPPC9-201ENST00000389328 LMTK2Q8IWU2 1503 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 HIBADHP31937 336 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 TRIM65Q6PJ69 517 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 HS2ST1Q7LGA3 356 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 MYOCDQ8IZQ8 938 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 MICAL1Q8TDZ2 1067 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 DHTKD1Q96HY7 919 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 ADD3Q9UEY8 706 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 TFR2Q9UP52 801 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 POTEJP0CG39 1038 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 TNFAIP3P21580 790 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 CTNNA2P26232 953 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 RASGRF1Q13972 1273 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 SNCBQ16143 134 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 BEND6Q5SZJ8 279 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 RASGRP2Q7LDG7 609 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 IQCDQ96DY2 449 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 ZC3H13Q5T200 1668 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 LGALS16A8MUM7 142 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 FAM13AO94988 1023 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 RPL13P26373 211 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 APBA1Q02410 837 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 U2AF1L4Q8WU68 220 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 NUCKS1Q9H1E3 243 aaKnown RBP14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 HPS5Q9UPZ3 1129 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 PLEKHG1Q9ULL1 1385 aa14.5□□□□□ -0.09
TRAPPC9-201ENST00000389328 RGS16O15492 202 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 IFNAR2P48551 515 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 FOXO4P98177 505 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 KRT26Q7Z3Y9 468 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 SLF2Q8IX21 1173 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 ODF2LQ9ULJ1 636 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 ATP6V0A2Q9Y487 856 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 EPB41P11171 864 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 SF3B2Q13435 895 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 RABL6Q3YEC7 729 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 FBXW10Q5XX13 1052 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 ALS2CLQ60I27 953 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 EMBQ6PCB8 327 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 MTUS1Q9ULD2 1270 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 SHPRHQ149N8 1683 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 ERVV-2B6SEH9 535 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 SPOPO43791 374 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 CCNE1P24864 410 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 TRAPPC10P48553 1259 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 DENND2CQ68D51 928 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 NFRKBQ6P4R8 1299 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 TCP11Q8WWU5 503 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 MRRFQ96E11 262 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 NAP1L3Q99457 506 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 PSD3Q9NYI0 1048 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 LOC102724159A0A0B4J2E5 919 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 NCK2O43639 380 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 SETDB1Q15047 1291 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 PWP2Q15269 919 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 INTS8Q75QN2 995 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 MAPKAPK5Q8IW41 473 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 ANKRD42Q8N9B4 389 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 IFT74Q96LB3 600 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 VEZTQ9HBM0 779 aa14.49□□□□□ -0.09
TRAPPC9-201ENST00000389328 CHD1O14646 1710 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 PRPF3O43395 683 aaKnown RBP14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 GYPCP04921 128 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 GSTA5Q7RTV2 222 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 RPGRQ92834 1020 aaKnown RBP14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 NKIRAS1Q9NYS0 192 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 ASAP1Q9ULH1 1129 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 CYP27B1O15528 508 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 DDAH1O94760 285 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 TFRCP02786 760 aaKnown RBP14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 PCK1P35558 622 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 ZBTB16Q05516 673 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 SEL1L2Q5TEA6 688 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 TTLL11Q8NHH1 800 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 THAP9Q9H5L6 903 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 PCDHB13Q9Y5F0 798 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 PALLDQ8WX93 1383 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 ATP11AP98196 1134 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 KSR1Q8IVT5 923 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 SETDB2Q96T68 719 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 CTTNBP2NLQ9P2B4 639 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 PXDNLA1KZ92 1463 aa14.48□□□□□ -0.09
TRAPPC9-201ENST00000389328 OVOS2A0A0J9YW53 1432 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 OVOS2Q6IE36 1432 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 KLRF2D3W0D1 207 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 PLCG1P19174 1290 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 MRPL12P52815 198 aaKnown RBP14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 SH2D3CQ8N5H7 860 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 VIRMAQ69YN4 1812 aaKnown RBP14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 PEX19P40855 299 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 RFX5P48382 616 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 NEK8Q86SG6 692 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 VSIG1Q86XK7 387 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 TEX11Q8IYF3 940 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 TGFBRAP1Q8WUH2 860 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 DISC1Q9NRI5 854 aa14.47□□□□□ -0.09
TRAPPC9-201ENST00000389328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.47□□□□□ -0.092e-6■■■■□ 22.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms