RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 TMTC1Q8IUR5 882 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 MXD3Q9BW11 206 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 YY1AP1Q9H869 796 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 DBNDD1Q9H9R9 158 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 ABCB6Q9NP58 842 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 PUF60Q9UHX1 559 aaKnown RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 BAZ2BQ9UIF8 2168 aaKnown RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 hCG_1642624A0A1W2PR95 340 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 KRT2P35908 639 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 TOB1P50616 345 aaPredicted RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 TRIM14Q14142 442 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 MTF1Q14872 753 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 PTPN21Q16825 1174 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 MAP9Q49MG5 647 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 APTXQ7Z2E3 356 aaKnown RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 OXER1Q8TDS5 423 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 SHISA4Q96DD7 197 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 IRX2Q9BZI1 471 aaPredicted RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 SAMSN1Q9NSI8 373 aaKnown RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 USP40Q9NVE5 1235 aa10.04□□□□□ -0.8
GPNMB-202ENST00000381990 ADD3Q9UEY8 706 aaKnown RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 SRPRBQ9Y5M8 271 aaKnown RBP10.04□□□□□ -0.8
GPNMB-202ENST00000381990 FOXN1O15353 648 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
GPNMB-202ENST00000381990 SCG2P13521 617 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 AARSP49588 968 aaKnown RBP eCLIP10.03□□□□□ -0.8
GPNMB-202ENST00000381990 SCNN1DP51172 638 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 RBL2Q08999 1139 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 HSP90AA4PQ58FG1 418 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 CDKAL1Q5VV42 579 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 PPM1EQ8WY54 764 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 TMEM47Q9BQJ4 181 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 MRIQ9BWK5 157 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 ZSWIM4Q9H7M6 989 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 STX8Q9UNK0 236 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 FAN1Q9Y2M0 1017 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 SYNRGQ9UMZ2 1314 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 ECE2O60344 883 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 HDLBPQ00341 1268 aaKnown RBP10.03□□□□□ -0.8
GPNMB-202ENST00000381990 PFKFB3Q16875 520 aaPredicted RBP10.03□□□□□ -0.8
GPNMB-202ENST00000381990 TRMT44Q8IYL2 757 aaKnown RBP10.03□□□□□ -0.8
GPNMB-202ENST00000381990 SUPT20HQ8NEM7 779 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 FAM107BQ9H098 131 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
GPNMB-202ENST00000381990 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 SCN9AQ15858 1988 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 CRKP46108 304 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 VSNL1P62760 191 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 GABPAQ06546 454 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 PICALMQ13492 652 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 DACT2Q5SW24 774 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 APOBEC3HQ6NTF7 200 aaKnown RBP10.03□□□□□ -0.8
GPNMB-202ENST00000381990 CDC42EP5Q6NZY7 148 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 CCDC148Q8NFR7 591 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 CCDC102AQ96A19 550 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 RPGRIP1Q96KN7 1286 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 GSDMAQ96QA5 445 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 MED15Q96RN5 788 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 LZTS2Q9BRK4 669 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
GPNMB-202ENST00000381990 KCNQ5Q9NR82 932 aa10.03□□□□□ -0.8
GPNMB-202ENST00000381990 ADAMTSL1Q8N6G6 1762 aa10.02□□□□□ -0.8
GPNMB-202ENST00000381990 C10orf71Q711Q0 1435 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 NOVP48745 357 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 ICE2Q659A1 982 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 CYP26C1Q6V0L0 522 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 ZDHHC15Q96MV8 337 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 MAD2L2Q9UI95 211 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 PLIN4Q96Q06 1357 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 ZNF646O15015 1829 aaPredicted RBP10.02□□□□□ -0.81
GPNMB-202ENST00000381990 PALM3A6NDB9 673 aaPredicted RBP10.02□□□□□ -0.81
GPNMB-202ENST00000381990 CORO7P57737 925 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 SPAG1Q07617 926 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 CUL4BQ13620 913 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 NPY5RQ15761 445 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 TTC31Q49AM3 519 aaPredicted RBP10.02□□□□□ -0.81
GPNMB-202ENST00000381990 GRIPAP1Q4V328 841 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 SLC35F6Q8N357 371 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 STAG2Q8N3U4 1231 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 SH3GLB2Q9NR46 395 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 SWAP70Q9UH65 585 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 MYH8P13535 1937 aa10.02□□□□□ -0.81
GPNMB-202ENST00000381990 MYO3BQ8WXR4 1341 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 LRRC10BA6NIK2 292 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 TRIM75PA6NK02 468 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 EIF3CLB5ME19 914 aaKnown RBP10.01□□□□□ -0.81
GPNMB-202ENST00000381990 TEX33O43247 280 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 PPFIA4O75335 1185 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 GYPCP04921 128 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 CALML3P27482 149 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 CASP14P31944 242 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 EFCAB13Q8IY85 973 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 TNFRSF25Q93038 417 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 CEP95Q96GE4 821 aa10.01□□□□□ -0.81
GPNMB-202ENST00000381990 EIF3CQ99613 913 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms