RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 CKAP2LQ8IYA6 745 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 ZMYND12Q9H0C1 365 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 C6orf50Q9HD87 102 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 DACT1Q9NYF0 836 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 hCG_1984214I3L0E3 225 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 RIOK3O14730 519 aaKnown RBP14.16□□□□□ -0.14
CIITA-202ENST00000381835 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
CIITA-202ENST00000381835 VCAM1P19320 739 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 PTGS1P23219 599 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 GNA11P29992 359 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 PIK3AP1Q6ZUJ8 805 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 ZNF713Q8N859 430 aaPredicted RBP14.16□□□□□ -0.14
CIITA-202ENST00000381835 CNKSR2Q8WXI2 1034 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 TNFRSF25Q93038 417 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 TANGO6Q9C0B7 1094 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 FEM1BQ9UK73 627 aa14.16□□□□□ -0.14
CIITA-202ENST00000381835 TOB1P50616 345 aaPredicted RBP14.15□□□□□ -0.14
CIITA-202ENST00000381835 STK38Q15208 465 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 SF3A1Q15459 793 aaKnown RBP14.15□□□□□ -0.14
CIITA-202ENST00000381835 USH1GQ495M9 461 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 ANO6Q4KMQ2 910 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 ANO1Q5XXA6 986 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 GALNT17Q6IS24 598 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 FAM160B2Q86V87 743 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 DRC7Q8IY82 874 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 ANKRD13AQ8IZ07 590 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 CLMNQ96JQ2 1002 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 ELP3Q9H9T3 547 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 POLR3EQ9NVU0 708 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 RTEL1Q9NZ71 1219 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 AFG3L2Q9Y4W6 797 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 PCDHA1Q9Y5I3 950 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 PAPPA2Q9BXP8 1791 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 RILPL1Q5EBL4 403 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 FBXO11Q86XK2 927 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 AMNQ9BXJ7 453 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 RPAP3Q9H6T3 665 aaPredicted RBP14.15□□□□□ -0.14
CIITA-202ENST00000381835 RCOR1Q9UKL0 485 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 PCDHA6Q9UN73 950 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 PCDHA8Q9Y5H6 950 aa14.15□□□□□ -0.14
CIITA-202ENST00000381835 TAL1P17542 331 aaPredicted RBP14.14□□□□□ -0.15
CIITA-202ENST00000381835 CCDC174Q6PII3 467 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 ARMC9Q7Z3E5 817 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 LDHDQ86WU2 507 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 FAM177A1Q8N128 213 aaPredicted RBP14.14□□□□□ -0.15
CIITA-202ENST00000381835 DAGLBQ8NCG7 672 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 LINC00301Q8NCQ3 95 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 CBX8Q9HC52 389 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 DDX19AQ9NUU7 478 aaKnown RBP14.14□□□□□ -0.15
CIITA-202ENST00000381835 CCDC194A0A1B0GVG4 234 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 C19orf81C9J6K1 198 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 PLA2G6O60733 806 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 FLOT1O75955 427 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 ADCY7P51828 1080 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 BIN2Q9UBW5 565 aaPredicted RBP14.14□□□□□ -0.15
CIITA-202ENST00000381835 PCDHB6Q9Y5E3 794 aa14.14□□□□□ -0.15
CIITA-202ENST00000381835 PTPRFP10586 1907 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 ESYT2A0FGR8 921 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 M0R2N6 131 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 YEATS4O95619 227 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 ME1P48163 572 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 CBX1P83916 185 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 PPP1R18Q6NYC8 613 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 CCDC186Q7Z3E2 898 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 REXO1Q8N1G1 1221 aaKnown RBP14.13□□□□□ -0.15
CIITA-202ENST00000381835 PDCL2Q8N4E4 241 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 OTUD5Q96G74 571 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 SLF1Q9BQI6 1058 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 TRIM5Q9C035 493 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 TMOD4Q9NZQ9 345 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 SPTLC2O15270 562 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 JAKMIP3Q5VZ66 844 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 PRPF38AQ8NAV1 312 aaKnown RBP14.13□□□□□ -0.15
CIITA-202ENST00000381835 BICD2Q8TD16 824 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 PGBD1Q96JS3 809 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 CLSTN2Q9H4D0 955 aa14.13□□□□□ -0.15
CIITA-202ENST00000381835 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
CIITA-202ENST00000381835 MARCKSP29966 332 aaPredicted RBP14.12□□□□□ -0.15
CIITA-202ENST00000381835 UBE2SQ16763 222 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 CUL5Q93034 780 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 RANBP17Q9H2T7 1088 aaKnown RBP14.12□□□□□ -0.15
CIITA-202ENST00000381835 PSTPIP2Q9H939 334 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 RIC8AQ9NPQ8 531 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 TMEM260Q9NX78 707 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 WNT7AO00755 349 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 IRF6O14896 467 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 SLC39A14Q15043 492 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 INF2Q27J81 1249 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 ERO1BQ86YB8 467 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 RBM46Q8TBY0 533 aaKnown RBP14.12□□□□□ -0.15
CIITA-202ENST00000381835 KCNG4Q8TDN1 519 aa14.12□□□□□ -0.15
CIITA-202ENST00000381835 NR1I2O75469 434 aa14.11□□□□□ -0.15
CIITA-202ENST00000381835 ZNF75DP51815 510 aa14.11□□□□□ -0.15
CIITA-202ENST00000381835 MRPL12P52815 198 aaKnown RBP14.11□□□□□ -0.15
CIITA-202ENST00000381835 PPATQ06203 517 aa14.11□□□□□ -0.15
CIITA-202ENST00000381835 PTPAQ15257 358 aa14.11□□□□□ -0.15
CIITA-202ENST00000381835 TTC38Q5R3I4 469 aa14.11□□□□□ -0.15
CIITA-202ENST00000381835 C12orf42Q96LP6 360 aa14.11□□□□□ -0.15
CIITA-202ENST00000381835 NRBP1Q9UHY1 535 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms