RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 WDR78Q5VTH9 848 aa14.64□□□□□ -0.07
SMN1-202ENST00000380707 SHCBP1Q8NEM2 672 aa14.64□□□□□ -0.07
SMN1-202ENST00000380707 CD99L2Q8TCZ2 262 aa14.64□□□□□ -0.07
SMN1-202ENST00000380707 GPKOWQ92917 476 aaPredicted RBP eCLIP14.64□□□□□ -0.07
SMN1-202ENST00000380707 TRIM47Q96LD4 638 aa14.64□□□□□ -0.07
SMN1-202ENST00000380707 MROH8Q9H579 483 aa14.64□□□□□ -0.07
SMN1-202ENST00000380707 PTPDC1A2A3K4 754 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 K7ELQ4 463 aaPredicted RBP14.63□□□□□ -0.07
SMN1-202ENST00000380707 FDPSP14324 419 aaKnown RBP14.63□□□□□ -0.07
SMN1-202ENST00000380707 MAPK4P31152 587 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 PSMC4P43686 418 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 AKAP17AQ02040 695 aaKnown RBP14.63□□□□□ -0.07
SMN1-202ENST00000380707 PFKFB3Q16875 520 aaPredicted RBP14.63□□□□□ -0.07
SMN1-202ENST00000380707 WWC2Q6AWC2 1192 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 HEATR3Q7Z4Q2 680 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 GPR142Q7Z601 462 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 CCAR1Q8IX12 1150 aaKnown RBP14.63□□□□□ -0.07
SMN1-202ENST00000380707 TRIM22Q8IYM9 498 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 CLEC4DQ8WXI8 215 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 RNF146Q9NTX7 359 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 PNMA2Q9UL42 364 aa14.63□□□□□ -0.07
SMN1-202ENST00000380707 MYH6P13533 1939 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 NFIBO00712 420 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 SCG2P13521 617 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 COPB2P35606 906 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 CTCFP49711 727 aaPredicted RBP14.62□□□□□ -0.07
SMN1-202ENST00000380707 LBX1P52954 281 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 TKFCQ3LXA3 575 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 TYW1BQ6NUM6 668 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 CHST13Q8NET6 341 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 LLPHQ9BRT6 129 aaKnown RBP14.62□□□□□ -0.07
SMN1-202ENST00000380707 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 RBM27Q9P2N5 1060 aaKnown RBP14.62□□□□□ -0.07
SMN1-202ENST00000380707 ZSWIM8A7E2V4 1837 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 BRCA2P51587 3418 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 ABCB11O95342 1321 aa14.62□□□□□ -0.07
SMN1-202ENST00000380707 TNPO2O14787 897 aaKnown RBP14.61□□□□□ -0.07
SMN1-202ENST00000380707 OPLAHO14841 1288 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 DEXIO95424 95 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 FCGRTP55899 365 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 CUL4AQ13619 759 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 KIF22Q14807 665 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 PLEKHH3Q7Z736 793 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 HSCBQ8IWL3 235 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 SMARCC2Q8TAQ2 1214 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 AIFM3Q96NN9 605 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 ACAD9Q9H845 621 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 BARHL2Q9NY43 387 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 ORC3Q9UBD5 711 aaPredicted RBP14.61□□□□□ -0.07
SMN1-202ENST00000380707 FBXO40Q9UH90 709 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 MRPL11Q9Y3B7 192 aaKnown RBP14.61□□□□□ -0.07
SMN1-202ENST00000380707 STK36Q9NRP7 1315 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 STXBP3O00186 592 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 TRAF1Q13077 416 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 TBC1D5Q92609 795 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 SHISA4Q96DD7 197 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 ERO1AQ96HE7 468 aa14.61□□□□□ -0.07
SMN1-202ENST00000380707 CWC22Q9HCG8 908 aaKnown RBP14.61□□□□□ -0.07
SMN1-202ENST00000380707 STRNO43815 780 aa14.6□□□□□ -0.07
SMN1-202ENST00000380707 FCER1AP12319 257 aa14.6□□□□□ -0.07
SMN1-202ENST00000380707 PTPREP23469 700 aa14.6□□□□□ -0.07
SMN1-202ENST00000380707 MORN1Q5T089 497 aa14.6□□□□□ -0.07
SMN1-202ENST00000380707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMN1-202ENST00000380707 ANKRD35Q8N283 1001 aa14.6□□□□□ -0.07
SMN1-202ENST00000380707 MMP19Q99542 508 aa14.6□□□□□ -0.07
SMN1-202ENST00000380707 A1CFQ9NQ94 594 aaKnown RBP14.6□□□□□ -0.07
SMN1-202ENST00000380707 GJD2Q9UKL4 321 aa14.6□□□□□ -0.07
SMN1-202ENST00000380707 IVNS1ABPQ9Y6Y0 642 aa14.6□□□□□ -0.07
SMN1-202ENST00000380707 MGAMO43451 1857 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 DOCK3Q8IZD9 2030 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 hCG_1984214I3L0E3 225 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 PGK2P07205 417 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 ADORA2AP29274 412 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 NAPAP54920 295 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 GRB14Q14449 540 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 KCTD2Q14681 263 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 NSMFQ6X4W1 530 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 ABRAQ8N0Z2 381 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 ZNF713Q8N859 430 aaPredicted RBP14.59□□□□□ -0.07
SMN1-202ENST00000380707 RGS22Q8NE09 1264 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 CYP39A1Q9NYL5 469 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 VPS54Q9P1Q0 977 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 CASP8AP2Q9UKL3 1982 aa14.59□□□□□ -0.07
SMN1-202ENST00000380707 SLC15A5A6NIM6 579 aa14.58□□□□□ -0.08
SMN1-202ENST00000380707 RPS6P62753 249 aaKnown RBP14.58□□□□□ -0.08
SMN1-202ENST00000380707 HMGN5P82970 282 aaKnown RBP14.58□□□□□ -0.08
SMN1-202ENST00000380707 BAATQ14032 418 aaPredicted RBP14.58□□□□□ -0.08
SMN1-202ENST00000380707 USP6NLQ92738 828 aa14.58□□□□□ -0.08
SMN1-202ENST00000380707 ALG1Q9BT22 464 aa14.58□□□□□ -0.08
SMN1-202ENST00000380707 GJB4Q9NTQ9 266 aa14.58□□□□□ -0.08
SMN1-202ENST00000380707 GABRQQ9UN88 632 aa14.58□□□□□ -0.08
SMN1-202ENST00000380707 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.58□□□□□ -0.08
SMN1-202ENST00000380707 SMCO2A6NFE2 343 aa14.57□□□□□ -0.08
SMN1-202ENST00000380707 COBLO75128 1261 aa14.57□□□□□ -0.08
SMN1-202ENST00000380707 CFBP00751 764 aa14.57□□□□□ -0.08
SMN1-202ENST00000380707 HOXA13P31271 388 aaPredicted RBP14.57□□□□□ -0.08
SMN1-202ENST00000380707 PRKCZQ05513 592 aa14.57□□□□□ -0.08
SMN1-202ENST00000380707 PPP1R18Q6NYC8 613 aa14.57□□□□□ -0.08
SMN1-202ENST00000380707 SLC30A10Q6XR72 485 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms