RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 BCS1LQ9Y276 419 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 WNT10BO00744 389 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 BMP3P12645 472 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 ATP1A3P13637 1013 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 CLK2P49760 499 aaKnown RBP17.03■□□□□ 0.32
SNX2-201ENST00000379516 FANCCQ00597 558 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 NBPF9Q3BBW0 867 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 RRAGBQ5VZM2 374 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 CDAN1Q8IWY9 1227 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 MYOZ2Q9NPC6 264 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 FANCLQ9NW38 375 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
SNX2-201ENST00000379516 SHTN1A0MZ66 631 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 TECP42680 631 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNX2-201ENST00000379516 TNIP1Q15025 636 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 MIGA2Q7L4E1 593 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 FAM83AQ86UY5 434 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 AK8Q96MA6 479 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 MTRQ99707 1265 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.32
SNX2-201ENST00000379516 GTPBP6O43824 516 aaPredicted RBP17.02■□□□□ 0.31
SNX2-201ENST00000379516 ECE1P42892 770 aa17.02■□□□□ 0.31
SNX2-201ENST00000379516 SNAP25P60880 206 aa17.02■□□□□ 0.31
SNX2-201ENST00000379516 CUL4BQ13620 913 aa17.02■□□□□ 0.31
SNX2-201ENST00000379516 FILIP1Q7Z7B0 1213 aa17.02■□□□□ 0.31
SNX2-201ENST00000379516 SPICE1Q8N0Z3 855 aa17.02■□□□□ 0.31
SNX2-201ENST00000379516 ZBED3Q96IU2 234 aaPredicted RBP17.02■□□□□ 0.31
SNX2-201ENST00000379516 PLIN2Q99541 437 aa17.02■□□□□ 0.31
SNX2-201ENST00000379516 PYCARDQ9ULZ3 195 aa17.02■□□□□ 0.31
SNX2-201ENST00000379516 TDP2O95551 362 aa17.01■□□□□ 0.31
SNX2-201ENST00000379516 SERPINC1P01008 464 aa17.01■□□□□ 0.31
SNX2-201ENST00000379516 CALCRLQ16602 461 aa17.01■□□□□ 0.31
SNX2-201ENST00000379516 SYDE2Q5VT97 1194 aa17.01■□□□□ 0.31
SNX2-201ENST00000379516 CABP7Q86V35 215 aa17.01■□□□□ 0.31
SNX2-201ENST00000379516 TRMT44Q8IYL2 757 aaKnown RBP17.01■□□□□ 0.31
SNX2-201ENST00000379516 ENOX1Q8TC92 643 aaKnown RBP17.01■□□□□ 0.31
SNX2-201ENST00000379516 SLC37A4O43826 429 aa17■□□□□ 0.31
SNX2-201ENST00000379516 EDIL3O43854 480 aa17■□□□□ 0.31
SNX2-201ENST00000379516 TXKP42681 527 aa17■□□□□ 0.31
SNX2-201ENST00000379516 LRMPQ12912 555 aa17■□□□□ 0.31
SNX2-201ENST00000379516 NAALADL2Q58DX5 795 aa17■□□□□ 0.31
SNX2-201ENST00000379516 C17orf53Q8N3J3 647 aaPredicted RBP17■□□□□ 0.31
SNX2-201ENST00000379516 GLT8D2Q9H1C3 349 aa17■□□□□ 0.31
SNX2-201ENST00000379516 ZBTB21Q9ULJ3 1066 aa17■□□□□ 0.31
SNX2-201ENST00000379516 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
SNX2-201ENST00000379516 NFE2L3Q9Y4A8 694 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L15C9J2P7 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L13C9JLJ4 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L11C9JVI0 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L18D6R9N7 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L22D6RA61 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L17D6RBQ6 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L19D6RCP7 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L20D6RJB6 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 TBC1D12O60347 775 aa17■□□□□ 0.31
SNX2-201ENST00000379516 ERCC5P28715 1186 aaPredicted RBP17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L24Q0WX57 530 aa17■□□□□ 0.31
SNX2-201ENST00000379516 USP17L6PQ6QN14 398 aa17■□□□□ 0.31
SNX2-201ENST00000379516 ACER1Q8TDN7 264 aa17■□□□□ 0.31
SNX2-201ENST00000379516 MTMR9Q96QG7 549 aa17■□□□□ 0.31
SNX2-201ENST00000379516 AMNQ9BXJ7 453 aa17■□□□□ 0.31
SNX2-201ENST00000379516 CD2APQ9Y5K6 639 aa17■□□□□ 0.31
SNX2-201ENST00000379516 CD44P16070 742 aaKnown RBP16.99■□□□□ 0.31
SNX2-201ENST00000379516 UBASH3AP57075 661 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 NOLC1Q14978 699 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNX2-201ENST00000379516 HSP90AA4PQ58FG1 418 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 CT47A1Q5JQC4 288 aaPredicted RBP16.99■□□□□ 0.31
SNX2-201ENST00000379516 KLHL10Q6JEL2 608 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 SMYD4Q8IYR2 804 aaPredicted RBP16.99■□□□□ 0.31
SNX2-201ENST00000379516 CACTINQ8WUQ7 758 aaKnown RBP16.99■□□□□ 0.31
SNX2-201ENST00000379516 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
SNX2-201ENST00000379516 TMX2Q9Y320 296 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 OFD1O75665 1012 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 FBXO11Q86XK2 927 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 MED15Q96RN5 788 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 GOPCQ9HD26 462 aa16.99■□□□□ 0.31
SNX2-201ENST00000379516 CBFA2T2O43439 604 aa16.98■□□□□ 0.31
SNX2-201ENST00000379516 RPN1P04843 607 aaKnown RBP16.98■□□□□ 0.31
SNX2-201ENST00000379516 CDK11BP21127 795 aaKnown RBP16.98■□□□□ 0.31
SNX2-201ENST00000379516 ARID5BQ14865 1188 aa16.98■□□□□ 0.31
SNX2-201ENST00000379516 TMEM266Q2M3C6 531 aa16.98■□□□□ 0.31
SNX2-201ENST00000379516 USH1GQ495M9 461 aa16.98■□□□□ 0.31
SNX2-201ENST00000379516 BTNL9Q6UXG8 535 aa16.98■□□□□ 0.31
SNX2-201ENST00000379516 TMC6Q7Z403 805 aa16.98■□□□□ 0.31
SNX2-201ENST00000379516 IGSF22Q8N9C0 903 aa16.98■□□□□ 0.31
SNX2-201ENST00000379516 RMND1Q9NWS8 449 aa16.98■□□□□ 0.31
SNX2-201ENST00000379516 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.98■□□□□ 0.31
SNX2-201ENST00000379516 PPP1R3GB7ZBB8 358 aa16.97■□□□□ 0.31
SNX2-201ENST00000379516 PLCG1P19174 1290 aa16.97■□□□□ 0.31
SNX2-201ENST00000379516 CAP2P40123 477 aa16.97■□□□□ 0.31
SNX2-201ENST00000379516 RASSF7Q02833 373 aa16.97■□□□□ 0.31
SNX2-201ENST00000379516 KIAA1755Q5JYT7 1200 aa16.97■□□□□ 0.31
SNX2-201ENST00000379516 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.97■□□□□ 0.31
SNX2-201ENST00000379516 LRRC8AQ8IWT6 810 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms