RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 HPS3Q969F9 1004 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 PAGE5Q96GU1 130 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 FRMD4BQ9Y2L6 1034 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 TTLL1O95922 423 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 GH2P01242 217 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 ADGRF4Q8IZF3 695 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 POLD4Q9HCU8 107 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 CTNND2Q9UQB3 1225 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
NEDD9-201ENST00000379433 KLRG2A4D1S0 409 aaPredicted RBP12.17□□□□□ -0.46
NEDD9-201ENST00000379433 ERICH4A6NGS2 130 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 YDJCA8MPS7 323 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 SMTNL1A8MU46 457 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 ACTN4O43707 911 aaKnown RBP12.17□□□□□ -0.46
NEDD9-201ENST00000379433 SLC30A10Q6XR72 485 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 REXO1Q8N1G1 1221 aaKnown RBP12.17□□□□□ -0.46
NEDD9-201ENST00000379433 SDR16C5Q8N3Y7 309 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 CCDC148Q8NFR7 591 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 GDAQ9Y2T3 454 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 LY75O60449 1722 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 GAKO14976 1311 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 TDP2O95551 362 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 TXLNAP40222 546 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 NCAPHQ15003 741 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 POTEDQ86YR6 584 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 DNAJC18Q9H819 358 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 CENPFP49454 3210 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 RCAN1P53805 252 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 ADKP55263 362 aaKnown RBP12.17□□□□□ -0.46
NEDD9-201ENST00000379433 DACT2Q5SW24 774 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 C15orf52Q6ZUT6 534 aaKnown RBP12.17□□□□□ -0.46
NEDD9-201ENST00000379433 LRRC8AQ8IWT6 810 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 KIAA1524Q8TCG1 905 aa12.17□□□□□ -0.46
NEDD9-201ENST00000379433 POTEMA6NI47 508 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 CD44P16070 742 aaKnown RBP12.16□□□□□ -0.46
NEDD9-201ENST00000379433 UBXN2AP68543 259 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 ICA1Q05084 483 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 CCDC178Q5BJE1 867 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 DYMQ7RTS9 669 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 TTLL6Q8N841 843 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 TNFRSF25Q93038 417 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 ZHX3Q9H4I2 956 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 FAM198AQ9UFP1 575 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 A0A1B0GUL6 1792 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 PSMD14O00487 310 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 SFPQP23246 707 aaKnown RBP eCLIP12.16□□□□□ -0.464e-6■■□□□ 13.1
NEDD9-201ENST00000379433 ATP2C1P98194 919 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-201ENST00000379433 NONOQ15233 471 aaKnown RBP eCLIP12.16□□□□□ -0.46
NEDD9-201ENST00000379433 ZFYVE27Q5T4F4 411 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 SH3BP5LQ7L8J4 393 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 FCHSD1Q86WN1 690 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 IQUBQ8NA54 791 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 CCDC34Q96HJ3 373 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 FZD1Q9UP38 647 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 SNED1Q8TER0 1413 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-201ENST00000379433 ANKRD62A6NC57 917 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 CAVIN2O95810 425 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 IDEP14735 1019 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 HOXA13P31271 388 aaPredicted RBP12.16□□□□□ -0.46
NEDD9-201ENST00000379433 ECE1P42892 770 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 PRAMEF18Q5VWM3 479 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 TMC4Q7Z404 712 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 MTERF4Q7Z6M4 381 aaKnown RBP12.16□□□□□ -0.46
NEDD9-201ENST00000379433 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 BCS1LQ9Y276 419 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
NEDD9-201ENST00000379433 NEMFO60524 1076 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 SLFN14P0C7P3 912 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 JAG1P78504 1218 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 FERMT2Q96AC1 680 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.15□□□□□ -0.46
NEDD9-201ENST00000379433 V9GYY5 206 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-201ENST00000379433 TRIM49BA6NDI0 452 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 GNA11P29992 359 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 STRIP1Q5VSL9 837 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 SLFN13Q68D06 897 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 ZNF662Q6ZS27 426 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 FAM163AQ96GL9 167 aaPredicted RBP12.15□□□□□ -0.46
NEDD9-201ENST00000379433 TIGD1Q96MW7 591 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 VPS16Q9H269 839 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 TUBE1Q9UJT0 475 aa12.15□□□□□ -0.46
NEDD9-201ENST00000379433 SH3BP5O60239 455 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 BAG6P46379 1132 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 MDM2Q00987 491 aaPredicted RBP12.14□□□□□ -0.47
NEDD9-201ENST00000379433 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
NEDD9-201ENST00000379433 BIRC2Q13490 618 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 DLGAP5Q15398 846 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 ABCB5Q2M3G0 1257 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 CAMKK2Q96RR4 588 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 JMJD4Q9H9V9 463 aa12.14□□□□□ -0.47
NEDD9-201ENST00000379433 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms