RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 N4BP3O15049 544 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 CCP110O43303 1012 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 FECHP22830 423 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 TXLNAP40222 546 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 APOBEC3HQ6NTF7 200 aaKnown RBP15.07■□□□□ 0
CCDC3-202ENST00000378839 CABP7Q86V35 215 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 CERS3Q8IU89 383 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 SMAP1Q8IYB5 467 aaPredicted RBP15.07■□□□□ 0
CCDC3-202ENST00000378839 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 GIMAP8Q8ND71 665 aaPredicted RBP15.07■□□□□ 0
CCDC3-202ENST00000378839 GJA10Q969M2 543 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 CTAGE1Q96RT6 745 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 DUSP9Q99956 384 aaKnown RBP15.07■□□□□ 0
CCDC3-202ENST00000378839 PYM1Q9BRP8 204 aaKnown RBP15.07■□□□□ 0
CCDC3-202ENST00000378839 QSER1Q2KHR3 1735 aa15.07■□□□□ 0
CCDC3-202ENST00000378839 RHOBTB3O94955 611 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 FCER1AP12319 257 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 CDC42EP5Q6NZY7 148 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 POTEAQ6S8J7 498 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 KRT25Q7Z3Z0 450 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 NEK8Q86SG6 692 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 MTMR9Q96QG7 549 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 CARD6Q9BX69 1037 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 COA1Q9GZY4 146 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 C6orf50Q9HD87 102 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 LZTFL1Q9NQ48 299 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 ITIH6Q6UXX5 1313 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 COL11A2P13942 1736 aaPredicted RBP15.06■□□□□ 0
CCDC3-202ENST00000378839 TDP2O95551 362 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 STK4Q13043 487 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 NUDT12Q9BQG2 462 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 DNAJC18Q9H819 358 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 USP40Q9NVE5 1235 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 DDX41Q9UJV9 622 aaKnown RBP15.06■□□□□ 0
CCDC3-202ENST00000378839 NRXN2Q9P2S2 1712 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 H2AFXP16104 143 aaPredicted RBP15.06■□□□□ 0
CCDC3-202ENST00000378839 KCNB1Q14721 858 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 TTI2Q6NXR4 508 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 KRT27Q7Z3Y8 459 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 PPFIBP1Q86W92 1011 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 ACRBPQ8NEB7 543 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 ZNF397Q8NF99 534 aaPredicted RBP15.06■□□□□ 0
CCDC3-202ENST00000378839 RASSF8Q8NHQ8 419 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 JMJD4Q9H9V9 463 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 RMND1Q9NWS8 449 aa15.06■□□□□ 0
CCDC3-202ENST00000378839 RASSF10A6NK89 507 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 LAD1O00515 517 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 TUBB4AP04350 444 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 SMARCA1P28370 1054 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 SLC16A2P36021 539 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 CACNB3P54284 484 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 MAP3K9P80192 1104 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 TRIM9Q9C026 710 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 ABHD10Q9NUJ1 306 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 SEC63Q9UGP8 760 aaKnown RBP15.05■□□□□ -0
CCDC3-202ENST00000378839 FAM196BA6NMK8 535 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 TADA3O75528 432 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 ZSCAN20P17040 1043 aaPredicted RBP15.05■□□□□ -0
CCDC3-202ENST00000378839 SLF2Q8IX21 1173 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 REXO1Q8N1G1 1221 aaKnown RBP15.05■□□□□ -0
CCDC3-202ENST00000378839 ZNF507Q8TCN5 953 aa15.05■□□□□ -0
CCDC3-202ENST00000378839 MYH8P13535 1937 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 TFRCP02786 760 aaKnown RBP15.04■□□□□ -0
CCDC3-202ENST00000378839 TXKP42681 527 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 GRB10Q13322 594 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 UBE2SQ16763 222 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 ADGRF4Q8IZF3 695 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 PNMA5Q96PV4 448 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 CHP1Q99653 195 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 SRRTQ9BXP5 876 aaKnown RBP15.04■□□□□ -0
CCDC3-202ENST00000378839 BLOC1S4Q9NUP1 217 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 GNA11P29992 359 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 KLK7P49862 253 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 FILIP1LQ4L180 1135 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 ECM1Q16610 540 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 ANKRD40Q6AI12 368 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 FAM53CQ9NYF3 392 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 MRFAP1Q9Y605 127 aa15.04■□□□□ -0
CCDC3-202ENST00000378839 SIPA1L1O43166 1804 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 ESYT2A0FGR8 921 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 H7C1D1 291 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 CASQ1P31415 396 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 UBXN1Q04323 297 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 ZNF543Q08ER8 600 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 ARHGAP29Q52LW3 1261 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 KCTD1Q719H9 257 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 KIAA0895Q8NCT3 520 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 AKT1S1Q96B36 256 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 UIMC1Q96RL1 719 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 ZC3H12CQ9C0D7 883 aaKnown RBP15.03■□□□□ -0
CCDC3-202ENST00000378839 DBNDD1Q9H9R9 158 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 SERPINB13Q9UIV8 391 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 REXO2Q9Y3B8 237 aaKnown RBP15.03■□□□□ -0
CCDC3-202ENST00000378839 CCDC175P0C221 793 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 SOGA3Q5TF21 947 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 KCNK18Q7Z418 384 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 AK8Q96MA6 479 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 C7orf25Q9BPX7 421 aa15.03■□□□□ -0
CCDC3-202ENST00000378839 GREB1LQ9C091 1923 aaPredicted RBP15.03■□□□□ -0
CCDC3-202ENST00000378839 TTC26A0AVF1 554 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms