RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 NFIBO00712 420 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 CALM1P0DP23 149 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 CALM2P0DP24 149 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 CALM3P0DP25 149 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 USH1GQ495M9 461 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 MFSD14CQ5VZR4 134 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 APOA5Q6Q788 366 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 CCDC144CPQ8IYA2 1237 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 CTCFLQ8NI51 663 aaPredicted RBP23.88■■□□□ 1.41
TRIM13-203ENST00000378183 PNMA2Q9UL42 364 aa23.88■■□□□ 1.41
TRIM13-203ENST00000378183 MCM3APO60318 1980 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 PPP1R11O60927 126 aaPredicted RBP23.87■■□□□ 1.41
TRIM13-203ENST00000378183 GJB1P08034 283 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 EN2P19622 333 aaPredicted RBP23.87■■□□□ 1.41
TRIM13-203ENST00000378183 CNTN2Q02246 1040 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 RUFY3Q7L099 469 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 FBXL16Q8N461 479 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 FAM133AQ8N9E0 248 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 FANCBQ8NB91 859 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 TRPV1Q8NER1 839 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 PIGSQ96S52 555 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 AGXT2Q9BYV1 514 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 TM6SF1Q9BZW5 370 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.87■■□□□ 1.415e-7■■■■■ 28.2
TRIM13-203ENST00000378183 HMX1Q9NP08 348 aaPredicted RBP23.87■■□□□ 1.41
TRIM13-203ENST00000378183 CYP39A1Q9NYL5 469 aa23.87■■□□□ 1.41
TRIM13-203ENST00000378183 ZBTB5O15062 677 aa23.86■■□□□ 1.41
TRIM13-203ENST00000378183 PLEKHA8P1O95397 391 aa23.86■■□□□ 1.41
TRIM13-203ENST00000378183 CCND3P30281 292 aaPredicted RBP23.86■■□□□ 1.41
TRIM13-203ENST00000378183 KIF5BP33176 963 aa23.86■■□□□ 1.41
TRIM13-203ENST00000378183 RGS19P49795 217 aa23.86■■□□□ 1.41
TRIM13-203ENST00000378183 MICU3Q86XE3 530 aa23.86■■□□□ 1.41
TRIM13-203ENST00000378183 FBXO11Q86XK2 927 aa23.86■■□□□ 1.41
TRIM13-203ENST00000378183 SRBD1Q8N5C6 995 aaKnown RBP23.86■■□□□ 1.41
TRIM13-203ENST00000378183 PFASO15067 1338 aa23.85■■□□□ 1.41
TRIM13-203ENST00000378183 KLF18A0A0U1RQI7 1052 aa23.85■■□□□ 1.41
TRIM13-203ENST00000378183 APOBRQ0VD83 1088 aa23.85■■□□□ 1.41
TRIM13-203ENST00000378183 NSMFQ6X4W1 530 aa23.85■■□□□ 1.41
TRIM13-203ENST00000378183 CMTR1Q8N1G2 835 aaKnown RBP23.85■■□□□ 1.41
TRIM13-203ENST00000378183 BRF1Q92994 677 aa23.85■■□□□ 1.41
TRIM13-203ENST00000378183 SHISA4Q96DD7 197 aa23.85■■□□□ 1.41
TRIM13-203ENST00000378183 TINF2Q9BSI4 451 aa23.85■■□□□ 1.41
TRIM13-203ENST00000378183 SPZ1Q9BXG8 430 aa23.85■■□□□ 1.41
TRIM13-203ENST00000378183 ABCB11O95342 1321 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 FRMPD3Q5JV73 1810 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 SOWAHBA6NEL2 793 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 POTEB2H3BUK9 544 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 CYBAP13498 195 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 SMARCA1P28370 1054 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 GJA8P48165 433 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 BAATQ14032 418 aaPredicted RBP23.84■■□□□ 1.41
TRIM13-203ENST00000378183 PRAMEF19Q5SWL8 479 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 MAMDC4Q6UXC1 1216 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 SYNE3Q6ZMZ3 975 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 ZNF467Q7Z7K2 595 aaPredicted RBP23.84■■□□□ 1.41
TRIM13-203ENST00000378183 HOMER1Q86YM7 354 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 DEFB118Q96PH6 123 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 PURBQ96QR8 312 aaKnown RBP23.84■■□□□ 1.41
TRIM13-203ENST00000378183 UPF3BQ9BZI7 483 aaKnown RBP23.84■■□□□ 1.41
TRIM13-203ENST00000378183 CYP46A1Q9Y6A2 500 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 ASTN1O14525 1302 aa23.84■■□□□ 1.41
TRIM13-203ENST00000378183 ZBTB43O43298 467 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 EIF5BO60841 1220 aaKnown RBP23.83■■□□□ 1.41
TRIM13-203ENST00000378183 SGPL1O95470 568 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 GNAQP50148 359 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 FGD1P98174 961 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 TMTC3Q6ZXV5 915 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 U2AF1L4Q8WU68 220 aaKnown RBP23.83■■□□□ 1.41
TRIM13-203ENST00000378183 TBC1D5Q92609 795 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 IL17RAQ96F46 866 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 LZTS2Q9BRK4 669 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 AMNQ9BXJ7 453 aa23.83■■□□□ 1.41
TRIM13-203ENST00000378183 PNMA6FA0A0J9YX94 578 aa23.82■■□□□ 1.4
TRIM13-203ENST00000378183 SNAI1O95863 264 aaPredicted RBP23.82■■□□□ 1.4
TRIM13-203ENST00000378183 ANAPC15P60006 121 aa23.82■■□□□ 1.4
TRIM13-203ENST00000378183 TOB2Q14106 344 aaPredicted RBP23.82■■□□□ 1.4
TRIM13-203ENST00000378183 SLC30A10Q6XR72 485 aa23.82■■□□□ 1.4
TRIM13-203ENST00000378183 MSL3Q8N5Y2 521 aaKnown RBP23.82■■□□□ 1.4
TRIM13-203ENST00000378183 PIBF1Q8WXW3 757 aa23.82■■□□□ 1.4
TRIM13-203ENST00000378183 CRISPLD2Q9H0B8 497 aa23.82■■□□□ 1.4
TRIM13-203ENST00000378183 FAM217BQ9NTX9 383 aaPredicted RBP23.82■■□□□ 1.4
TRIM13-203ENST00000378183 PTPDC1A2A3K4 754 aa23.81■■□□□ 1.4
TRIM13-203ENST00000378183 OPLAHO14841 1288 aa23.81■■□□□ 1.4
TRIM13-203ENST00000378183 RNF207Q6ZRF8 634 aa23.81■■□□□ 1.4
TRIM13-203ENST00000378183 RGS22Q8NE09 1264 aa23.81■■□□□ 1.4
TRIM13-203ENST00000378183 SYNGAP1Q96PV0 1343 aa23.81■■□□□ 1.4
TRIM13-203ENST00000378183 CDC27P30260 824 aa23.8■■□□□ 1.4
TRIM13-203ENST00000378183 RCAN1P53805 252 aa23.8■■□□□ 1.4
TRIM13-203ENST00000378183 EVCP57679 992 aa23.8■■□□□ 1.4
TRIM13-203ENST00000378183 RPS6P62753 249 aaKnown RBP23.8■■□□□ 1.4
TRIM13-203ENST00000378183 RTN1Q16799 776 aa23.8■■□□□ 1.4
TRIM13-203ENST00000378183 LHX8Q68G74 356 aa23.8■■□□□ 1.4
TRIM13-203ENST00000378183 RBM28Q9NW13 759 aaKnown RBP23.8■■□□□ 1.4
TRIM13-203ENST00000378183 MRPL11Q9Y3B7 192 aaKnown RBP23.8■■□□□ 1.4
TRIM13-203ENST00000378183 PCDHA1Q9Y5I3 950 aa23.8■■□□□ 1.4
TRIM13-203ENST00000378183 DDX49Q9Y6V7 483 aaKnown RBP23.8■■□□□ 1.4
TRIM13-203ENST00000378183 LRRC37A2A6NM11 1700 aa23.79■■□□□ 1.4
TRIM13-203ENST00000378183 GOLGA8AA7E2F4 631 aa23.79■■□□□ 1.4
TRIM13-203ENST00000378183 GOLGA8BA8MQT2 603 aa23.79■■□□□ 1.4
TRIM13-203ENST00000378183 ZNF865P0CJ78 1059 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms