RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CAMTA2O94983 1202 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 MIIPQ5JXC2 388 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 CPVLQ9H3G5 476 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 KAT14Q9H8E8 782 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 KBTBD4Q9NVX7 518 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 ZNHIT6Q9NWK9 470 aaKnown RBP20.11■□□□□ 0.81
GNE-201ENST00000377902 PCDHA6Q9UN73 950 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 PCDHA4Q9UN74 947 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 PCDHA8Q9Y5H6 950 aa20.11■□□□□ 0.81
GNE-201ENST00000377902 CCDC194A0A1B0GVG4 234 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 TARSL2A2RTX5 802 aaKnown RBP20.1■□□□□ 0.81
GNE-201ENST00000377902 CRKLP46109 303 aaKnown RBP20.1■□□□□ 0.81
GNE-201ENST00000377902 MTIF2P46199 727 aaKnown RBP20.1■□□□□ 0.81
GNE-201ENST00000377902 CKAP4Q07065 602 aaKnown RBP20.1■□□□□ 0.81
GNE-201ENST00000377902 CCDC96Q2M329 555 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 CERS3Q8IU89 383 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 CREG2Q8IUH2 290 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 NSUN4Q96CB9 384 aaKnown RBP20.1■□□□□ 0.81
GNE-201ENST00000377902 PPFIA4O75335 1185 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 PLCG1P19174 1290 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 MAGEA9P43362 315 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 PDE4DQ08499 809 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 KCNB1Q14721 858 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 NOC4LQ9BVI4 516 aaKnown RBP20.1■□□□□ 0.81
GNE-201ENST00000377902 IL17RBQ9NRM6 502 aa20.1■□□□□ 0.81
GNE-201ENST00000377902 MOCS3O95396 460 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 USP17L8P0C7I0 530 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 PRDX5P30044 214 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 HSPA2P54652 639 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 CORO7P57737 925 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 SND1Q7KZF4 910 aaKnown RBP eCLIP20.09■□□□□ 0.81
GNE-201ENST00000377902 SECISBP2LQ93073 1101 aaKnown RBP20.09■□□□□ 0.81
GNE-201ENST00000377902 IPO7O95373 1038 aaKnown RBP20.09■□□□□ 0.81
GNE-201ENST00000377902 ZBED6P86452 979 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 KIF5AQ12840 1032 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 DYNLL2Q96FJ2 89 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 TFCP2L1Q9NZI6 479 aa20.09■□□□□ 0.81
GNE-201ENST00000377902 GOLGA6BA6NDN3 693 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 M0R2N6 131 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 ORC4O43929 436 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 MCM3P25205 808 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 CAVIN4Q5BKX8 364 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 DNAJC21Q5F1R6 531 aaKnown RBP20.08■□□□□ 0.81
GNE-201ENST00000377902 NFRKBQ6P4R8 1299 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 HEATR3Q7Z4Q2 680 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 ANKRD13CQ8N6S4 541 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 P2RX5Q93086 422 aa20.08■□□□□ 0.81
GNE-201ENST00000377902 PURBQ96QR8 312 aaKnown RBP20.08■□□□□ 0.81
GNE-201ENST00000377902 NUTM2BA6NNL0 878 aaPredicted RBP20.08■□□□□ 0.8
GNE-201ENST00000377902 NUTM2EB1AL46 878 aaPredicted RBP20.08■□□□□ 0.8
GNE-201ENST00000377902 CYTH3O43739 400 aa20.08■□□□□ 0.8
GNE-201ENST00000377902 CALML3P27482 149 aa20.08■□□□□ 0.8
GNE-201ENST00000377902 TFAP4Q01664 338 aa20.08■□□□□ 0.8
GNE-201ENST00000377902 ATP2B2Q01814 1243 aa20.08■□□□□ 0.8
GNE-201ENST00000377902 EHBP1Q8NDI1 1231 aa20.08■□□□□ 0.8
GNE-201ENST00000377902 ACSBG1Q96GR2 724 aa20.08■□□□□ 0.8
GNE-201ENST00000377902 CCDC42Q96M95 316 aa20.08■□□□□ 0.8
GNE-201ENST00000377902 FAM207AQ9NSI2 230 aaPredicted RBP20.08■□□□□ 0.8
GNE-201ENST00000377902 SLAIN2Q9P270 581 aa20.08■□□□□ 0.8
GNE-201ENST00000377902 MYH10P35580 1976 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 USP17L3A6NCW0 530 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 USP17L4A6NCW7 530 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 GOLGA6CA6NDK9 693 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 NCK2O43639 380 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 GOLGA6DP0CG33 693 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 GOLGA8HP0CJ92 632 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 ATP6V1AP38606 617 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 VAV2P52735 878 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 USP17L1Q7RTZ2 530 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 C2CD5Q86YS7 1000 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 CCDC87Q9NVE4 849 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 GOLGA6AQ9NYA3 693 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 ARHGAP20Q9P2F6 1191 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 SNX12Q9UMY4 172 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 ASIC1P78348 528 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 ERFEQ4G0M1 354 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 ZNF662Q6ZS27 426 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 ANKRD18AQ8IVF6 992 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 PNMA1Q8ND90 353 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 AENQ8WTP8 325 aaKnown RBP20.07■□□□□ 0.8
GNE-201ENST00000377902 POLD4Q9HCU8 107 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 MCM9Q9NXL9 1143 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 MINPP1Q9UNW1 487 aa20.07■□□□□ 0.8
GNE-201ENST00000377902 CCT5P48643 541 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 SMIM5Q71RC9 77 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 CCDC170Q8IYT3 715 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 FAM76AQ8TAV0 307 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 CELF1Q92879 486 aaKnown RBP20.06■□□□□ 0.8
GNE-201ENST00000377902 RPGRIP1Q96KN7 1286 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 TRIM9Q9C026 710 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 SLC39A2Q9NP94 309 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 SALL4Q9UJQ4 1053 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 FLT1P17948 1338 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 CCNE1P24864 410 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 IRAK1P51617 712 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 TTC31Q49AM3 519 aaPredicted RBP20.06■□□□□ 0.8
GNE-201ENST00000377902 CABP7Q86V35 215 aa20.06■□□□□ 0.8
GNE-201ENST00000377902 DHTKD1Q96HY7 919 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms