RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 IL17RBQ9NRM6 502 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 GH2P01242 217 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 HARSP12081 509 aaKnown RBP13.04□□□□□ -0.32
DDR1-227ENST00000376570 SSR1P43307 286 aaKnown RBP13.04□□□□□ -0.32
DDR1-227ENST00000376570 ICA1Q05084 483 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
DDR1-227ENST00000376570 TMEM132AQ24JP5 1023 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
DDR1-227ENST00000376570 PIGOQ8TEQ8 1089 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 E9PMD0 336 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 ARHGAP6O43182 974 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 ALX1Q15699 326 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 CERS3Q8IU89 383 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 PCDHA12Q9UN75 941 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 SALL1Q9NSC2 1324 aa13.04□□□□□ -0.32
DDR1-227ENST00000376570 DDAH1O94760 285 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 PLCG2P16885 1265 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDR1-227ENST00000376570 PFKFB3Q16875 520 aaPredicted RBP13.03□□□□□ -0.32
DDR1-227ENST00000376570 CUL5Q93034 780 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 ERO1AQ96HE7 468 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 TSG101Q99816 390 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 RMND1Q9NWS8 449 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 DAGLAQ9Y4D2 1042 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 CTAGE9A4FU28 777 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 RASA1P20936 1047 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 AMPD3Q01432 767 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 SEC23AQ15436 765 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 ZNF277Q9NRM2 450 aaPredicted RBP13.03□□□□□ -0.32
DDR1-227ENST00000376570 FZD1Q9UP38 647 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 ANKRD65E5RJM6 399 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 BMP15O95972 392 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 CDR1P51861 262 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 NCAPHQ15003 741 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 TMC4Q7Z404 712 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 GSPT2Q8IYD1 628 aaKnown RBP13.03□□□□□ -0.32
DDR1-227ENST00000376570 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
DDR1-227ENST00000376570 LEMD3Q9Y2U8 911 aa13.03□□□□□ -0.32
DDR1-227ENST00000376570 ZBTB7AO95365 584 aa13.02□□□□□ -0.32
DDR1-227ENST00000376570 GPBP1Q86WP2 473 aa13.02□□□□□ -0.32
DDR1-227ENST00000376570 SMARCAL1Q9NZC9 954 aa13.02□□□□□ -0.32
DDR1-227ENST00000376570 DDX25Q9UHL0 483 aaKnown RBP13.02□□□□□ -0.32
DDR1-227ENST00000376570 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.32
DDR1-227ENST00000376570 CNTNAP5Q8WYK1 1306 aa13.02□□□□□ -0.32
DDR1-227ENST00000376570 IFT81Q8WYA0 676 aa13.02□□□□□ -0.33
DDR1-227ENST00000376570 TUBGCP2Q9BSJ2 902 aa13.02□□□□□ -0.33
DDR1-227ENST00000376570 PHF20Q9BVI0 1012 aa13.02□□□□□ -0.33
DDR1-227ENST00000376570 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.33
DDR1-227ENST00000376570 BCCIPQ9P287 314 aaKnown RBP eCLIP13.02□□□□□ -0.33
DDR1-227ENST00000376570 TBCAO75347 108 aaKnown RBP13.02□□□□□ -0.33
DDR1-227ENST00000376570 MRPL12P52815 198 aaKnown RBP13.02□□□□□ -0.33
DDR1-227ENST00000376570 APBA1Q02410 837 aa13.02□□□□□ -0.33
DDR1-227ENST00000376570 CNOT6LQ96LI5 555 aaKnown RBP13.02□□□□□ -0.33
DDR1-227ENST00000376570 FLT1P17948 1338 aa13.02□□□□□ -0.33
DDR1-227ENST00000376570 GYS1P13807 737 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 DPYDQ12882 1025 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 STK4Q13043 487 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 HLTFQ14527 1009 aaKnown RBP eCLIP13.01□□□□□ -0.33
DDR1-227ENST00000376570 CEP89Q96ST8 783 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 RUFY1Q96T51 708 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 TRIM31Q9BZY9 425 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 FAM208AQ9UK61 1670 aaKnown RBP13.01□□□□□ -0.33
DDR1-227ENST00000376570 CYTH3O43739 400 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 GJC1P36383 396 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 CALCOCO1Q9P1Z2 691 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 PCDHA6Q9UN73 950 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 PCDHA8Q9Y5H6 950 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 CTAGE15A4D2H0 777 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 POTECB2RU33 542 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 KIF2AO00139 706 aaPredicted RBP13.01□□□□□ -0.33
DDR1-227ENST00000376570 ACTN4O43707 911 aaKnown RBP13.01□□□□□ -0.33
DDR1-227ENST00000376570 GTPBP6O43824 516 aaPredicted RBP13.01□□□□□ -0.33
DDR1-227ENST00000376570 CTAGE8P0CG41 777 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 CYP2J2P51589 502 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 KRT25Q7Z3Z0 450 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 PHLDB2Q86SQ0 1253 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 CTAGE6Q86UF2 777 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 CTAGE4Q8IX94 777 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 CTAGE1Q96RT6 745 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.01□□□□□ -0.33
DDR1-227ENST00000376570 DISC1Q9NRI5 854 aa13.01□□□□□ -0.33
DDR1-227ENST00000376570 GCNT3O95395 438 aa13□□□□□ -0.33
DDR1-227ENST00000376570 ABL1P00519 1130 aa13□□□□□ -0.33
DDR1-227ENST00000376570 EEF2P13639 858 aaKnown RBP13□□□□□ -0.33
DDR1-227ENST00000376570 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
DDR1-227ENST00000376570 TTLL12Q14166 644 aaPredicted RBP13□□□□□ -0.33
DDR1-227ENST00000376570 ARHGAP44Q17R89 818 aa13□□□□□ -0.33
DDR1-227ENST00000376570 LEKR1Q6ZMV7 388 aa13□□□□□ -0.33
DDR1-227ENST00000376570 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
DDR1-227ENST00000376570 VPS18Q9P253 973 aa13□□□□□ -0.33
DDR1-227ENST00000376570 POTEFA5A3E0 1075 aa13□□□□□ -0.33
DDR1-227ENST00000376570 POTEIP0CG38 1075 aa13□□□□□ -0.33
DDR1-227ENST00000376570 PMS1P54277 932 aaKnown RBP13□□□□□ -0.33
DDR1-227ENST00000376570 CTTNQ14247 550 aaKnown RBP13□□□□□ -0.33
DDR1-227ENST00000376570 TTC19Q6DKK2 380 aaPredicted RBP13□□□□□ -0.33
DDR1-227ENST00000376570 CCDC70Q6NSX1 233 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms