RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 PRR12Q9ULL5 1215 aa14.32□□□□□ -0.12
CLCN6-206ENST00000376496 TMX2Q9Y320 296 aa14.32□□□□□ -0.12
CLCN6-206ENST00000376496 YBX3P16989 372 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLCN6-206ENST00000376496 HIRAP54198 1017 aaPredicted RBP14.31□□□□□ -0.12
CLCN6-206ENST00000376496 MDM2Q00987 491 aaPredicted RBP14.31□□□□□ -0.12
CLCN6-206ENST00000376496 KARSQ15046 597 aaKnown RBP14.31□□□□□ -0.12
CLCN6-206ENST00000376496 CCDC174Q6PII3 467 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 SYT17Q9BSW7 474 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 ZNF341Q9BYN7 854 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 RIC8AQ9NPQ8 531 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 ESYT2A0FGR8 921 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 H7C1D1 291 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 SLC37A4O43826 429 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 TBC1D12O60347 775 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 BMP15O95972 392 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 DHX40Q8IX18 779 aaKnown RBP14.31□□□□□ -0.12
CLCN6-206ENST00000376496 LMNB1P20700 586 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 BMP6P22004 513 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 POSTNQ15063 836 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 FEZ1Q99689 392 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 GGA3Q9NZ52 723 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 GPRC5DQ9NZD1 345 aa14.31□□□□□ -0.12
CLCN6-206ENST00000376496 HOXA13P31271 388 aaPredicted RBP14.3□□□□□ -0.12
CLCN6-206ENST00000376496 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 SPC24Q8NBT2 197 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 CUL5Q93034 780 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 ZKSCAN4Q969J2 545 aaPredicted RBP14.3□□□□□ -0.12
CLCN6-206ENST00000376496 NEMFO60524 1076 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 NLRP12P59046 1061 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 TNFAIP1Q13829 316 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 CEP57L1Q8IYX8 460 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 BLZF1Q9H2G9 400 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 RNF181Q9P0P0 153 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 TUBE1Q9UJT0 475 aa14.3□□□□□ -0.12
CLCN6-206ENST00000376496 TECP42680 631 aa14.29□□□□□ -0.12
CLCN6-206ENST00000376496 TXKP42681 527 aa14.29□□□□□ -0.12
CLCN6-206ENST00000376496 FBXO11Q86XK2 927 aa14.29□□□□□ -0.12
CLCN6-206ENST00000376496 TBC1D5Q92609 795 aa14.29□□□□□ -0.12
CLCN6-206ENST00000376496 VCPKMTQ9H867 229 aa14.29□□□□□ -0.12
CLCN6-206ENST00000376496 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
CLCN6-206ENST00000376496 hCG_1984214I3L0E3 225 aa14.29□□□□□ -0.12
CLCN6-206ENST00000376496 STAT2P52630 851 aa14.29□□□□□ -0.12
CLCN6-206ENST00000376496 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
CLCN6-206ENST00000376496 ZNF830Q96NB3 372 aaPredicted RBP14.29□□□□□ -0.12
CLCN6-206ENST00000376496 BECN2A8MW95 431 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 ASNSP08243 561 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 OR52Z1P0C646 297 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 CLK2P49760 499 aaKnown RBP14.28□□□□□ -0.12
CLCN6-206ENST00000376496 MRPL12P52815 198 aaKnown RBP14.28□□□□□ -0.12
CLCN6-206ENST00000376496 RASSF8Q8NHQ8 419 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 LRRC15Q8TF66 581 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 PAGE5Q96GU1 130 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 MAN1B1Q9UKM7 699 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 GOLGA6L19H0YKK7 550 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 OPLAHO14841 1288 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 PTMAP06454 111 aaKnown RBP14.28□□□□□ -0.12
CLCN6-206ENST00000376496 MAP3K10Q02779 954 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 MTRQ99707 1265 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 RRAGDQ9NQL2 400 aaPredicted RBP14.28□□□□□ -0.12
CLCN6-206ENST00000376496 POLR2AP24928 1970 aaKnown RBP14.28□□□□□ -0.12
CLCN6-206ENST00000376496 MYH7BA7E2Y1 1941 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 MEIS2O14770 477 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 E2F4Q16254 413 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 HSP90AA4PQ58FG1 418 aa14.28□□□□□ -0.12
CLCN6-206ENST00000376496 ARL6IP4Q66PJ3 421 aaKnown RBP14.28□□□□□ -0.12
CLCN6-206ENST00000376496 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
CLCN6-206ENST00000376496 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.12
CLCN6-206ENST00000376496 SLFN14P0C7P3 912 aa14.27□□□□□ -0.12
CLCN6-206ENST00000376496 PPP1R18Q6NYC8 613 aa14.27□□□□□ -0.12
CLCN6-206ENST00000376496 SMYD4Q8IYR2 804 aaPredicted RBP14.27□□□□□ -0.12
CLCN6-206ENST00000376496 GPC2Q8N158 579 aa14.27□□□□□ -0.12
CLCN6-206ENST00000376496 TRIM5Q9C035 493 aa14.27□□□□□ -0.12
CLCN6-206ENST00000376496 SBF1O95248 1867 aa14.27□□□□□ -0.13
CLCN6-206ENST00000376496 LONP1P36776 959 aaKnown RBP14.27□□□□□ -0.13
CLCN6-206ENST00000376496 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.13
CLCN6-206ENST00000376496 SMARCE1Q969G3 411 aa14.27□□□□□ -0.13
CLCN6-206ENST00000376496 MORC2Q9Y6X9 1032 aaPredicted RBP14.27□□□□□ -0.13
CLCN6-206ENST00000376496 FCHSD1Q86WN1 690 aa14.26□□□□□ -0.13
CLCN6-206ENST00000376496 WRNIP1Q96S55 665 aa14.26□□□□□ -0.13
CLCN6-206ENST00000376496 POTEMA6NI47 508 aa14.26□□□□□ -0.13
CLCN6-206ENST00000376496 COBLO75128 1261 aa14.26□□□□□ -0.13
CLCN6-206ENST00000376496 MTMR2Q13614 643 aa14.26□□□□□ -0.13
CLCN6-206ENST00000376496 CALCRLQ16602 461 aa14.26□□□□□ -0.13
CLCN6-206ENST00000376496 PDXDC2PQ6P474 469 aa14.26□□□□□ -0.13
CLCN6-206ENST00000376496 FAM177A1Q8N128 213 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-206ENST00000376496 ANO3Q9BYT9 981 aa14.26□□□□□ -0.13
CLCN6-206ENST00000376496 UBA7P41226 1012 aa14.25□□□□□ -0.13
CLCN6-206ENST00000376496 UBXN2AP68543 259 aa14.25□□□□□ -0.13
CLCN6-206ENST00000376496 CUL4BQ13620 913 aa14.25□□□□□ -0.13
CLCN6-206ENST00000376496 DHX8Q14562 1220 aaKnown RBP14.25□□□□□ -0.13
CLCN6-206ENST00000376496 ILDR2Q71H61 639 aa14.25□□□□□ -0.13
CLCN6-206ENST00000376496 TRMT44Q8IYL2 757 aaKnown RBP14.25□□□□□ -0.13
CLCN6-206ENST00000376496 STAT6P42226 847 aa14.25□□□□□ -0.13
CLCN6-206ENST00000376496 SPP2Q13103 211 aa14.25□□□□□ -0.13
CLCN6-206ENST00000376496 NAALADL2Q58DX5 795 aa14.25□□□□□ -0.13
CLCN6-206ENST00000376496 C9orf131Q5VYM1 1079 aa14.25□□□□□ -0.13
CLCN6-206ENST00000376496 NAT10Q9H0A0 1025 aaKnown RBP14.25□□□□□ -0.13
CLCN6-206ENST00000376496 DDX25Q9UHL0 483 aaKnown RBP14.25□□□□□ -0.13
CLCN6-206ENST00000376496 CFBP00751 764 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms