RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PARP14Q460N5 1801 aa26.34■■□□□ 1.81
HLA-C-202ENST00000376237 MRPL12P52815 198 aaKnown RBP26.34■■□□□ 1.81
HLA-C-202ENST00000376237 GRM1Q13255 1194 aa26.34■■□□□ 1.81
HLA-C-202ENST00000376237 TKFCQ3LXA3 575 aa26.34■■□□□ 1.81
HLA-C-202ENST00000376237 ZSCAN16Q9H4T2 348 aaPredicted RBP26.34■■□□□ 1.81
HLA-C-202ENST00000376237 IGF2BP3O00425 579 aaKnown RBP eCLIP26.33■■□□□ 1.81
HLA-C-202ENST00000376237 CYP2C8P10632 490 aa26.33■■□□□ 1.81
HLA-C-202ENST00000376237 KRT2P35908 639 aa26.33■■□□□ 1.81
HLA-C-202ENST00000376237 STAT3P40763 770 aa26.33■■□□□ 1.81
HLA-C-202ENST00000376237 DIS3L2Q8IYB7 885 aaKnown RBP26.33■■□□□ 1.81
HLA-C-202ENST00000376237 FOXP1Q9H334 677 aaPredicted RBP26.33■■□□□ 1.81
HLA-C-202ENST00000376237 PSTPIP2Q9H939 334 aa26.33■■□□□ 1.81
HLA-C-202ENST00000376237 RIC8AQ9NPQ8 531 aa26.33■■□□□ 1.81
HLA-C-202ENST00000376237 ADCY7P51828 1080 aa26.32■■□□□ 1.8
HLA-C-202ENST00000376237 MCTP1Q6DN14 999 aa26.32■■□□□ 1.8
HLA-C-202ENST00000376237 SNRNP48Q6IEG0 339 aaKnown RBP26.32■■□□□ 1.8
HLA-C-202ENST00000376237 BLIDQ8IZY5 108 aa26.32■■□□□ 1.8
HLA-C-202ENST00000376237 CUL5Q93034 780 aa26.32■■□□□ 1.8
HLA-C-202ENST00000376237 RBPJLQ9UBG7 517 aa26.32■■□□□ 1.8
HLA-C-202ENST00000376237 ZDHHC9Q9Y397 364 aa26.32■■□□□ 1.8
HLA-C-202ENST00000376237 GNL2Q13823 731 aaKnown RBP26.31■■□□□ 1.8
HLA-C-202ENST00000376237 NPY5RQ15761 445 aa26.31■■□□□ 1.8
HLA-C-202ENST00000376237 SAMD3Q8N6K7 520 aa26.31■■□□□ 1.8
HLA-C-202ENST00000376237 MAF1Q9H063 256 aa26.31■■□□□ 1.8
HLA-C-202ENST00000376237 BTBD7Q9P203 1132 aa26.31■■□□□ 1.8
HLA-C-202ENST00000376237 ALDH1A1P00352 501 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 F13A1P00488 732 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 ALAS1P13196 640 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 U2AF2P26368 475 aaKnown RBP eCLIP26.3■■□□□ 1.8
HLA-C-202ENST00000376237 COPB2P35606 906 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 MAP2K2P36507 400 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 PLS1Q14651 629 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 MCTP2Q6DN12 878 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 POTEEQ6S8J3 1075 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 MCF2L2Q86YR7 1114 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 RIOX2Q8IUF8 465 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 PAGR1Q9BTK6 254 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 SPATC1LQ9H0A9 340 aa26.3■■□□□ 1.8
HLA-C-202ENST00000376237 BTBD18B2RXH4 712 aa26.29■■□□□ 1.8
HLA-C-202ENST00000376237 TRERF1Q96PN7 1200 aa26.29■■□□□ 1.8
HLA-C-202ENST00000376237 ATP6V1DQ9Y5K8 247 aa26.29■■□□□ 1.8
HLA-C-202ENST00000376237 SLC25A27O95847 323 aa26.29■■□□□ 1.8
HLA-C-202ENST00000376237 TAF1CQ15572 869 aaPredicted RBP26.29■■□□□ 1.8
HLA-C-202ENST00000376237 BRAPQ7Z569 592 aa26.29■■□□□ 1.8
HLA-C-202ENST00000376237 CHST13Q8NET6 341 aa26.29■■□□□ 1.8
HLA-C-202ENST00000376237 ZIC5Q96T25 663 aa26.29■■□□□ 1.8
HLA-C-202ENST00000376237 MAP3K20Q9NYL2 800 aaKnown RBP26.29■■□□□ 1.8
HLA-C-202ENST00000376237 A0A0G2JMZ2 1700 aa26.28■■□□□ 1.8
HLA-C-202ENST00000376237 CNMDO75829 334 aa26.28■■□□□ 1.8
HLA-C-202ENST00000376237 FERMT3Q86UX7 667 aa26.28■■□□□ 1.8
HLA-C-202ENST00000376237 REXO1Q8N1G1 1221 aaKnown RBP26.28■■□□□ 1.8
HLA-C-202ENST00000376237 MORF4L1Q9UBU8 362 aa26.28■■□□□ 1.8
HLA-C-202ENST00000376237 FBXO40Q9UH90 709 aa26.28■■□□□ 1.8
HLA-C-202ENST00000376237 M0R2N6 131 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 PIK3CDO00329 1044 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 AOC2O75106 756 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 ERVK-9P63128 1117 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 ERVK-24P63145 666 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 CCNA1P78396 465 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 RESTQ13127 1097 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 NOSTRINQ8IVI9 506 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 GPRC5AQ8NFJ5 357 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 CLEC4DQ8WXI8 215 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 ZFYVE28Q9HCC9 887 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 TXNRD2Q9NNW7 524 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 RNF146Q9NTX7 359 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 RIPK3Q9Y572 518 aa26.27■■□□□ 1.8
HLA-C-202ENST00000376237 OPLAHO14841 1288 aa26.26■■□□□ 1.79
HLA-C-202ENST00000376237 GHRHRQ02643 423 aa26.26■■□□□ 1.79
HLA-C-202ENST00000376237 FOXD4L5Q5VV16 416 aaPredicted RBP26.26■■□□□ 1.79
HLA-C-202ENST00000376237 OXER1Q8TDS5 423 aa26.26■■□□□ 1.79
HLA-C-202ENST00000376237 FOXD4L4Q8WXT5 416 aaPredicted RBP26.26■■□□□ 1.79
HLA-C-202ENST00000376237 GCOM1H8Y6P7 765 aaPredicted RBP26.25■■□□□ 1.79
HLA-C-202ENST00000376237 POLR2MP0CAP2 368 aa26.25■■□□□ 1.79
HLA-C-202ENST00000376237 CLK2P49760 499 aaKnown RBP26.25■■□□□ 1.79
HLA-C-202ENST00000376237 VEGFBP49765 207 aa26.25■■□□□ 1.79
HLA-C-202ENST00000376237 C1QTNF8P60827 252 aa26.25■■□□□ 1.79
HLA-C-202ENST00000376237 NR5A1Q13285 461 aa26.25■■□□□ 1.79
HLA-C-202ENST00000376237 FAM110CQ1W6H9 321 aa26.25■■□□□ 1.79
HLA-C-202ENST00000376237 SHCBP1Q8NEM2 672 aa26.25■■□□□ 1.79
HLA-C-202ENST00000376237 MOV10L1Q9BXT6 1211 aaKnown RBP26.25■■□□□ 1.79
HLA-C-202ENST00000376237 ACAD9Q9H845 621 aa26.25■■□□□ 1.79
HLA-C-202ENST00000376237 HOMER2Q9NSB8 354 aa26.25■■□□□ 1.79
HLA-C-202ENST00000376237 KIF28PB7ZC32 967 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 MEIS2O14770 477 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 HSPA6P17066 643 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 TAL1P17542 331 aaPredicted RBP26.24■■□□□ 1.79
HLA-C-202ENST00000376237 AP3B2Q13367 1082 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 KRT25Q7Z3Z0 450 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 TNFRSF25Q93038 417 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 MROH8Q9H579 483 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 PCDHA6Q9UN73 950 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 PCDHA8Q9Y5H6 950 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 CA12O43570 354 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 TLR2O60603 784 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 CFBP00751 764 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 FOSP01100 380 aaPredicted RBP26.24■■□□□ 1.79
HLA-C-202ENST00000376237 Q3C1V9 767 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 MUM1L1Q5H9M0 696 aa26.24■■□□□ 1.79
HLA-C-202ENST00000376237 ANKRD13CQ8N6S4 541 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms