RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 NAP1L2Q9ULW6 460 aaPredicted RBP20.27■□□□□ 0.84
C6orf48-207ENST00000375642 TAL1P17542 331 aaPredicted RBP20.26■□□□□ 0.83
C6orf48-207ENST00000375642 SMARCA1P28370 1054 aa20.26■□□□□ 0.83
C6orf48-207ENST00000375642 USH1GQ495M9 461 aa20.26■□□□□ 0.83
C6orf48-207ENST00000375642 MUM1L1Q5H9M0 696 aa20.26■□□□□ 0.83
C6orf48-207ENST00000375642 FBXO11Q86XK2 927 aa20.26■□□□□ 0.83
C6orf48-207ENST00000375642 MTMR8Q96EF0 704 aa20.26■□□□□ 0.83
C6orf48-207ENST00000375642 AGXT2Q9BYV1 514 aa20.26■□□□□ 0.83
C6orf48-207ENST00000375642 PLXNB2O15031 1838 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 ZBTB5O15062 677 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 CYTH3O43739 400 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 APOBRQ0VD83 1088 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 SLC35G1Q2M3R5 365 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 ZNF792Q3KQV3 632 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 MFSD14CQ5VZR4 134 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 HOMER1Q86YM7 354 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 PIGSQ96S52 555 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 SPZ1Q9BXG8 430 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 AMNQ9BXJ7 453 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 A1CFQ9NQ94 594 aaKnown RBP20.25■□□□□ 0.83
C6orf48-207ENST00000375642 PDRG1Q9NUG6 133 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 RBM28Q9NW13 759 aaKnown RBP20.25■□□□□ 0.83
C6orf48-207ENST00000375642 FLRT1Q9NZU1 646 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 DIS3Q9Y2L1 958 aaKnown RBP20.25■□□□□ 0.83
C6orf48-207ENST00000375642 PFASO15067 1338 aa20.25■□□□□ 0.83
C6orf48-207ENST00000375642 KIAA0100Q14667 2235 aaKnown RBP20.25■□□□□ 0.83
C6orf48-207ENST00000375642 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 PLEKHA8P1O95397 391 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 CCL5P13501 91 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 RCAN1P53805 252 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 TRIM32Q13049 653 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 MTFR1Q15390 333 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 RTN1Q16799 776 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 OLFML2BQ68BL8 750 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 NSMFQ6X4W1 530 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 MAML3Q96JK9 1138 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 ABCB11O95342 1321 aa20.24■□□□□ 0.83
C6orf48-207ENST00000375642 PNMA6FA0A0J9YX94 578 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 GOLGA8AA7E2F4 631 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 GOLGA8BA8MQT2 603 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 POTEB2H3BUK9 544 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 NFIBO00712 420 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 PRKAR2AP13861 404 aaKnown RBP20.23■□□□□ 0.83
C6orf48-207ENST00000375642 TRAF1Q13077 416 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 TMTC3Q6ZXV5 915 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 SRBD1Q8N5C6 995 aaKnown RBP20.23■□□□□ 0.83
C6orf48-207ENST00000375642 CLEC4DQ8WXI8 215 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 RRP36Q96EU6 259 aaKnown RBP20.23■□□□□ 0.83
C6orf48-207ENST00000375642 IL17RAQ96F46 866 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 RNF208Q9H0X6 261 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 UNC93B1Q9H1C4 597 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 CYP39A1Q9NYL5 469 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 ZNF236Q9UL36 1845 aa20.23■□□□□ 0.83
C6orf48-207ENST00000375642 CYP2C19P33261 490 aa20.22■□□□□ 0.83
C6orf48-207ENST00000375642 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.831e-9■■■□□ 14.6
C6orf48-207ENST00000375642 TOB2Q14106 344 aaPredicted RBP20.22■□□□□ 0.83
C6orf48-207ENST00000375642 PPP2R5BQ15173 497 aa20.22■□□□□ 0.83
C6orf48-207ENST00000375642 CMTR1Q8N1G2 835 aaKnown RBP20.22■□□□□ 0.83
C6orf48-207ENST00000375642 CCDC82Q8N4S0 544 aa20.22■□□□□ 0.83
C6orf48-207ENST00000375642 MRPL11Q9Y3B7 192 aaKnown RBP20.22■□□□□ 0.83
C6orf48-207ENST00000375642 PCDHA1Q9Y5I3 950 aa20.22■□□□□ 0.83
C6orf48-207ENST00000375642 CCDC196A0A1B0GTZ2 297 aa20.21■□□□□ 0.83
C6orf48-207ENST00000375642 PPP1R11O60927 126 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-207ENST00000375642 IGHA2P01877 340 aa20.21■□□□□ 0.83
C6orf48-207ENST00000375642 EVCP57679 992 aa20.21■□□□□ 0.83
C6orf48-207ENST00000375642 CNTN2Q02246 1040 aa20.21■□□□□ 0.83
C6orf48-207ENST00000375642 CACNB2Q08289 660 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-207ENST00000375642 BAATQ14032 418 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-207ENST00000375642 MAP3K21Q5TCX8 1036 aa20.21■□□□□ 0.83
C6orf48-207ENST00000375642 ZNF467Q7Z7K2 595 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-207ENST00000375642 FAM133AQ8N9E0 248 aa20.21■□□□□ 0.83
C6orf48-207ENST00000375642 RGS22Q8NE09 1264 aa20.21■□□□□ 0.83
C6orf48-207ENST00000375642 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
C6orf48-207ENST00000375642 HMX1Q9NP08 348 aaPredicted RBP20.21■□□□□ 0.83
C6orf48-207ENST00000375642 SEC63Q9UGP8 760 aaKnown RBP20.21■□□□□ 0.83
C6orf48-207ENST00000375642 RPTORQ8N122 1335 aa20.21■□□□□ 0.83
C6orf48-207ENST00000375642 PTPDC1A2A3K4 754 aa20.2■□□□□ 0.82
C6orf48-207ENST00000375642 H0YGN5 161 aa20.2■□□□□ 0.82
C6orf48-207ENST00000375642 RNF207Q6ZRF8 634 aa20.2■□□□□ 0.82
C6orf48-207ENST00000375642 MCF2L2Q86YR7 1114 aa20.2■□□□□ 0.82
C6orf48-207ENST00000375642 MSL3Q8N5Y2 521 aaKnown RBP20.2■□□□□ 0.82
C6orf48-207ENST00000375642 TINF2Q9BSI4 451 aa20.2■□□□□ 0.82
C6orf48-207ENST00000375642 C22orf23Q9BZE7 217 aa20.2■□□□□ 0.82
C6orf48-207ENST00000375642 MAF1Q9H063 256 aa20.2■□□□□ 0.82
C6orf48-207ENST00000375642 PDIA3P30101 505 aaKnown RBP20.19■□□□□ 0.82
C6orf48-207ENST00000375642 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.19■□□□□ 0.821e-12■□□□□ 10
C6orf48-207ENST00000375642 ALDH8A1Q9H2A2 487 aaPredicted RBP20.19■□□□□ 0.82
C6orf48-207ENST00000375642 FAM217BQ9NTX9 383 aaPredicted RBP20.19■□□□□ 0.82
C6orf48-207ENST00000375642 BRCA2P51587 3418 aa20.19■□□□□ 0.82
C6orf48-207ENST00000375642 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
C6orf48-207ENST00000375642 GJB1P08034 283 aa20.18■□□□□ 0.82
C6orf48-207ENST00000375642 CALML3P27482 149 aa20.18■□□□□ 0.82
C6orf48-207ENST00000375642 CDC27P30260 824 aa20.18■□□□□ 0.82
C6orf48-207ENST00000375642 ADD1P35611 737 aaKnown RBP20.18■□□□□ 0.82
C6orf48-207ENST00000375642 RPS6P62753 249 aaKnown RBP20.18■□□□□ 0.82
C6orf48-207ENST00000375642 ANKRD1Q15327 319 aa20.18■□□□□ 0.82
C6orf48-207ENST00000375642 MAMDC4Q6UXC1 1216 aa20.18■□□□□ 0.82
C6orf48-207ENST00000375642 CHRDL2Q6WN34 429 aa20.18■□□□□ 0.82
C6orf48-207ENST00000375642 SLC30A10Q6XR72 485 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms