RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 IVNS1ABPQ9Y6Y0 642 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 CPLX1O14810 134 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 PRPF3O43395 683 aaKnown RBP13.15□□□□□ -0.3
HSPG2-202ENST00000374676 PPP1R11O60927 126 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-202ENST00000374676 FCER1AP12319 257 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 STK3Q13188 491 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 NOL8Q76FK4 1167 aaKnown RBP13.15□□□□□ -0.3
HSPG2-202ENST00000374676 RGS22Q8NE09 1264 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 GTF3C6Q969F1 213 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 NUDT12Q9BQG2 462 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-202ENST00000374676 SH2B1Q9NRF2 756 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-202ENST00000374676 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
HSPG2-202ENST00000374676 MRPL11Q9Y3B7 192 aaKnown RBP13.15□□□□□ -0.3
HSPG2-202ENST00000374676 TRIM17Q9Y577 477 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 PCDHA1Q9Y5I3 950 aa13.15□□□□□ -0.3
HSPG2-202ENST00000374676 V9GY48 417 aaPredicted RBP13.15□□□□□ -0.3
HSPG2-202ENST00000374676 ZNF236Q9UL36 1845 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-202ENST00000374676 LARGE1O95461 756 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 HOXC6P09630 235 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 IRF5Q13568 498 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 KCTD2Q14681 263 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
HSPG2-202ENST00000374676 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 SOCS4Q8WXH5 440 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 CLEC4DQ8WXI8 215 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 MMP19Q99542 508 aa13.14□□□□□ -0.31
HSPG2-202ENST00000374676 PLXNA1Q9UIW2 1896 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 CDKL5O76039 1030 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 XRCC5P13010 732 aaKnown RBP13.13□□□□□ -0.31
HSPG2-202ENST00000374676 ADORA2AP29274 412 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 RGS2P41220 211 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 FLT3LGP49771 235 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 AKAP17AQ02040 695 aaKnown RBP13.13□□□□□ -0.31
HSPG2-202ENST00000374676 PRKCZQ05513 592 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
HSPG2-202ENST00000374676 MAP2K5Q13163 448 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 PFKFB3Q16875 520 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-202ENST00000374676 USH1GQ495M9 461 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 MCF2L2Q86YR7 1114 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 ANKRD35Q8N283 1001 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
HSPG2-202ENST00000374676 NECAB1Q8N987 351 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 PIBF1Q8WXW3 757 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 PHKBQ93100 1093 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 HOMER2Q9NSB8 354 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 SLC5A4Q9NY91 659 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 PFASO15067 1338 aa13.13□□□□□ -0.31
HSPG2-202ENST00000374676 DNAJC25-GNG10A0A024R161 153 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 hCG_1642624A0A1W2PR95 340 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 NFIBO00712 420 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 COBLO75128 1261 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
HSPG2-202ENST00000374676 CTDNEP1O95476 244 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 TAL1P17542 331 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-202ENST00000374676 GHRHRQ02643 423 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 PKN1Q16512 942 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 FBXO46Q6PJ61 603 aaPredicted RBP13.12□□□□□ -0.31
HSPG2-202ENST00000374676 DPP9Q86TI2 863 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 TEX2Q8IWB9 1127 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 TRIM22Q8IYM9 498 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 DDX11Q96FC9 970 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 SLC26A6Q9BXS9 759 aa13.12□□□□□ -0.31
HSPG2-202ENST00000374676 A1CFQ9NQ94 594 aaKnown RBP13.12□□□□□ -0.31
HSPG2-202ENST00000374676 MAP3K20Q9NYL2 800 aaKnown RBP13.12□□□□□ -0.31
HSPG2-202ENST00000374676 DIS3Q9Y2L1 958 aaKnown RBP13.12□□□□□ -0.31
HSPG2-202ENST00000374676 OPLAHO14841 1288 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 DEXIO95424 95 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 SCG2P13521 617 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 CYP2B6P20813 491 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 BAATQ14032 418 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-202ENST00000374676 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 TRMT44Q8IYL2 757 aaKnown RBP13.11□□□□□ -0.31
HSPG2-202ENST00000374676 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 RAET1EQ8TD07 263 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 PXYLP1Q8TE99 480 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 TMX3Q96JJ7 454 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 LLPHQ9BRT6 129 aaKnown RBP13.11□□□□□ -0.31
HSPG2-202ENST00000374676 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 CYP39A1Q9NYL5 469 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 STK36Q9NRP7 1315 aa13.11□□□□□ -0.31
HSPG2-202ENST00000374676 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
HSPG2-202ENST00000374676 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 PGK2P07205 417 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
HSPG2-202ENST00000374676 ZNF792Q3KQV3 632 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 PPP1R18Q6NYC8 613 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 RNF207Q6ZRF8 634 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 HEATR3Q7Z4Q2 680 aa13.1□□□□□ -0.31
HSPG2-202ENST00000374676 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
HSPG2-202ENST00000374676 NSUN7Q8NE18 718 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms