RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TRIM17Q9Y577 477 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 IVNS1ABPQ9Y6Y0 642 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 ABCB11O95342 1321 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 PLXNA1Q9UIW2 1896 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
HSPG2-201ENST00000374673 TAL1P17542 331 aaPredicted RBP17.38■□□□□ 0.37
HSPG2-201ENST00000374673 MCM2P49736 904 aa17.38■□□□□ 0.37
HSPG2-201ENST00000374673 GRB14Q14449 540 aa17.38■□□□□ 0.37
HSPG2-201ENST00000374673 USH1GQ495M9 461 aa17.38■□□□□ 0.37
HSPG2-201ENST00000374673 MORN1Q5T089 497 aa17.38■□□□□ 0.37
HSPG2-201ENST00000374673 CPLX2Q6PUV4 134 aaKnown RBP17.38■□□□□ 0.37
HSPG2-201ENST00000374673 GTF3C6Q969F1 213 aa17.38■□□□□ 0.37
HSPG2-201ENST00000374673 RNF26Q9BY78 433 aaPredicted RBP17.38■□□□□ 0.37
HSPG2-201ENST00000374673 RBM27Q9P2N5 1060 aaKnown RBP17.38■□□□□ 0.37
HSPG2-201ENST00000374673 SRRDQ9UH36 339 aa17.38■□□□□ 0.37
HSPG2-201ENST00000374673 GJD2Q9UKL4 321 aa17.38■□□□□ 0.37
HSPG2-201ENST00000374673 CPLX1O14810 134 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 PRPF3O43395 683 aaKnown RBP17.37■□□□□ 0.37
HSPG2-201ENST00000374673 CD2BP2O95400 341 aaKnown RBP17.37■□□□□ 0.37
HSPG2-201ENST00000374673 FCER1AP12319 257 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 PRKCZQ05513 592 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 MUM1L1Q5H9M0 696 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 CLEC4DQ8WXI8 215 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 PIBF1Q8WXW3 757 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 USP6NLQ92738 828 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 MMP19Q99542 508 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 MAF1Q9H063 256 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 SH2B1Q9NRF2 756 aaPredicted RBP17.37■□□□□ 0.37
HSPG2-201ENST00000374673 HOMER2Q9NSB8 354 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 GABRQQ9UN88 632 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 LCTP09848 1927 aa17.37■□□□□ 0.37
HSPG2-201ENST00000374673 hCG_1984214I3L0E3 225 aa17.36■□□□□ 0.37
HSPG2-201ENST00000374673 CDKL5O76039 1030 aa17.36■□□□□ 0.37
HSPG2-201ENST00000374673 ST3GAL1Q11201 340 aa17.36■□□□□ 0.37
HSPG2-201ENST00000374673 MAP2K5Q13163 448 aa17.36■□□□□ 0.37
HSPG2-201ENST00000374673 KCTD2Q14681 263 aa17.36■□□□□ 0.37
HSPG2-201ENST00000374673 ZNF713Q8N859 430 aaPredicted RBP17.36■□□□□ 0.37
HSPG2-201ENST00000374673 MRPL11Q9Y3B7 192 aaKnown RBP17.36■□□□□ 0.37
HSPG2-201ENST00000374673 PCDHA1Q9Y5I3 950 aa17.36■□□□□ 0.37
HSPG2-201ENST00000374673 V9GY48 417 aaPredicted RBP17.36■□□□□ 0.37
HSPG2-201ENST00000374673 hCG_1642624A0A1W2PR95 340 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 NFIBO00712 420 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 ADORA2AP29274 412 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 FLT3LGP49771 235 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 IRF5Q13568 498 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 PKN2Q16513 984 aaKnown RBP17.35■□□□□ 0.37
HSPG2-201ENST00000374673 PFKFB3Q16875 520 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-201ENST00000374673 NECAB1Q8N987 351 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 PHKBQ93100 1093 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 SLC26A6Q9BXS9 759 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 A1CFQ9NQ94 594 aaKnown RBP17.35■□□□□ 0.37
HSPG2-201ENST00000374673 PTPN22Q9Y2R2 807 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 PFASO15067 1338 aa17.35■□□□□ 0.37
HSPG2-201ENST00000374673 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 HOXC6P09630 235 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 RGS2P41220 211 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 AKAP17AQ02040 695 aaKnown RBP17.34■□□□□ 0.37
HSPG2-201ENST00000374673 GHRHRQ02643 423 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 SSRP1Q08945 709 aaKnown RBP17.34■□□□□ 0.37
HSPG2-201ENST00000374673 PKN1Q16512 942 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 TRIM22Q8IYM9 498 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 APBA2Q99767 749 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 STK36Q9NRP7 1315 aa17.34■□□□□ 0.37
HSPG2-201ENST00000374673 DNAJC25-GNG10A0A024R161 153 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 OPLAHO14841 1288 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 DEXIO95424 95 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 XRCC5P13010 732 aaKnown RBP17.33■□□□□ 0.36
HSPG2-201ENST00000374673 SCG2P13521 617 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 WWC2Q6AWC2 1192 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 NSMFQ6X4W1 530 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 MCF2L2Q86YR7 1114 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 SAMD3Q8N6K7 520 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 GPKOWQ92917 476 aaPredicted RBP eCLIP17.33■□□□□ 0.36
HSPG2-201ENST00000374673 DDX11Q96FC9 970 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 SLC5A4Q9NY91 659 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 CYP39A1Q9NYL5 469 aa17.33■□□□□ 0.36
HSPG2-201ENST00000374673 DIS3Q9Y2L1 958 aaKnown RBP17.33■□□□□ 0.36
HSPG2-201ENST00000374673 COBLO75128 1261 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 CYP2B6P20813 491 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 ZNF792Q3KQV3 632 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 PPP1R18Q6NYC8 613 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 FBXO46Q6PJ61 603 aaPredicted RBP17.32■□□□□ 0.36
HSPG2-201ENST00000374673 RNF207Q6ZRF8 634 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 HEATR3Q7Z4Q2 680 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 DPP9Q86TI2 863 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 CCDC83Q8IWF9 413 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 NSUN7Q8NE18 718 aaKnown RBP17.32■□□□□ 0.36
HSPG2-201ENST00000374673 RAET1EQ8TD07 263 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 TMX3Q96JJ7 454 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 BARHL2Q9NY43 387 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 MAP3K20Q9NYL2 800 aaKnown RBP17.32■□□□□ 0.36
HSPG2-201ENST00000374673 PTCH2Q9Y6C5 1203 aa17.32■□□□□ 0.36
HSPG2-201ENST00000374673 PTPDC1A2A3K4 754 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 STXBP3O00186 592 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 PPFIA3O75145 1194 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 PGK2P07205 417 aa17.31■□□□□ 0.36
HSPG2-201ENST00000374673 RPS6P62753 249 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms