RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PPP2R5EQ16537 467 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 PPP1R21Q6ZMI0 780 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 TRPM8Q7Z2W7 1104 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 NEK9Q8TD19 979 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 GSDMAQ96QA5 445 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 KRT23Q9C075 422 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 USP44Q9H0E7 712 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 HELLSQ9NRZ9 838 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 RANBP6O60518 1105 aaKnown RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 TMCC1O94876 653 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 POLD1P28340 1107 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 IL9RQ01113 521 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 VWA3BQ502W6 1294 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 KIF2BQ8N4N8 673 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 RETREG2Q8NC44 543 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 EDC3Q96F86 508 aaKnown RBP11.22□□□□□ -0.61
CD28-202ENST00000374481 ASIC3Q9UHC3 531 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 KDRP35968 1356 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 PTCH1Q13635 1447 aa11.22□□□□□ -0.61
CD28-202ENST00000374481 SFMBT2Q5VUG0 894 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 CCDC105Q8IYK2 499 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 TMTC2Q8N394 836 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 EZH1Q92800 747 aaPredicted RBP11.21□□□□□ -0.61
CD28-202ENST00000374481 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
CD28-202ENST00000374481 SH3BP1Q9Y3L3 701 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 SLC4A7Q9Y6M7 1214 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 SBNO2Q9Y2G9 1366 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 ZNF185O15231 689 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 ASIC2Q16515 512 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 SLC9C2Q5TAH2 1124 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 ARL10Q8N8L6 244 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 RUBCNQ92622 972 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 BICD1Q96G01 975 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.61
CD28-202ENST00000374481 CCDC61Q9Y6R9 512 aa11.21□□□□□ -0.61
CD28-202ENST00000374481 TAF5LO75529 589 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 SERPINB3P29508 390 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 SPATA21Q7Z572 469 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 YTHDF3Q7Z739 585 aaKnown RBP11.21□□□□□ -0.62
CD28-202ENST00000374481 NOSTRINQ8IVI9 506 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 SYCE1Q8N0S2 351 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 ZNF653Q96CK0 615 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 CHMP2BQ9UQN3 213 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 TSC22D4Q9Y3Q8 395 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 SCINQ9Y6U3 715 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 IGF2BP3O00425 579 aaKnown RBP eCLIP11.21□□□□□ -0.62
CD28-202ENST00000374481 FTCDO95954 541 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 TOB2Q14106 344 aaPredicted RBP11.21□□□□□ -0.62
CD28-202ENST00000374481 KRT31Q15323 416 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 GSTA5Q7RTV2 222 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 EEF2KMTQ96G04 330 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 RMDN2Q96LZ7 410 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 FMO2Q99518 471 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 KCNJ14Q9UNX9 436 aa11.21□□□□□ -0.62
CD28-202ENST00000374481 CROCC2H7BZ55 1655 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 ARHGEF5Q12774 1597 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 CFAP74Q9C0B2 1584 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 IGHMBP2P38935 993 aaKnown RBP11.2□□□□□ -0.62
CD28-202ENST00000374481 PCYT1AP49585 367 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 PLTPP55058 493 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
CD28-202ENST00000374481 ANKRD20A8PQ5CZ79 823 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 UBE3BQ7Z3V4 1068 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 TBC1D5Q92609 795 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 FERMT2Q96AC1 680 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 DUOX2Q9NRD8 1548 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 RASGRF2O14827 1237 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 NVLO15381 856 aaKnown RBP11.2□□□□□ -0.62
CD28-202ENST00000374481 ZBED6P86452 979 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 DTHD1Q6ZMT9 781 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 ARHGEF18Q6ZSZ5 1173 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 APBB1IPQ7Z5R6 666 aaPredicted RBP11.2□□□□□ -0.62
CD28-202ENST00000374481 RUNDC3BQ96NL0 473 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 PUS7Q96PZ0 661 aaKnown RBP11.2□□□□□ -0.62
CD28-202ENST00000374481 NDUFB9Q9Y6M9 179 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 PTPRTO14522 1441 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 ADCY9O60503 1353 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 B4DLN1 442 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 MAPK13O15264 365 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 CYP21A2P08686 494 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 CTNNA2P26232 953 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 TMED10P49755 219 aaKnown RBP11.2□□□□□ -0.62
CD28-202ENST00000374481 RNASELQ05823 741 aaKnown RBP11.2□□□□□ -0.62
CD28-202ENST00000374481 PPARAQ07869 468 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 NFRKBQ6P4R8 1299 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 BZW1Q7L1Q6 419 aaKnown RBP11.2□□□□□ -0.62
CD28-202ENST00000374481 GDAP1Q8TB36 358 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 USP6NLQ92738 828 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 ATP6V0A2Q9Y487 856 aa11.2□□□□□ -0.62
CD28-202ENST00000374481 DKC1O60832 514 aaKnown RBP eCLIP11.19□□□□□ -0.62
CD28-202ENST00000374481 GSTA2P09210 222 aa11.19□□□□□ -0.62
CD28-202ENST00000374481 FAM200BP0CF97 657 aa11.19□□□□□ -0.62
CD28-202ENST00000374481 C6orf118Q5T5N4 469 aa11.19□□□□□ -0.62
CD28-202ENST00000374481 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
CD28-202ENST00000374481 ADAT2Q7Z6V5 191 aaKnown RBP11.19□□□□□ -0.62
CD28-202ENST00000374481 LCA5Q86VQ0 697 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms