RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 DTHD1Q6ZMT9 781 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 CSRNP1Q96S65 589 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 DACH1Q9UI36 760 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 A0A0G2JMZ2 1700 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 F5H6K3 240 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 NEMFO60524 1076 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
PRPF4-202ENST00000374199 KLRC3Q07444 240 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 NIM1KQ8IY84 436 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 DHX58Q96C10 678 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 TRIM5Q9C035 493 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
PRPF4-202ENST00000374199 GCFC2P16383 781 aaKnown RBP14.24□□□□□ -0.13
PRPF4-202ENST00000374199 MSNP26038 577 aaKnown RBP14.24□□□□□ -0.13
PRPF4-202ENST00000374199 HOXA7P31268 230 aaPredicted RBP14.24□□□□□ -0.13
PRPF4-202ENST00000374199 TBX2Q13207 712 aaPredicted RBP14.24□□□□□ -0.13
PRPF4-202ENST00000374199 QRICH1Q2TAL8 776 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 KIAA1755Q5JYT7 1200 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 COA7Q96BR5 231 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 NAP1L4Q99733 375 aaKnown RBP14.24□□□□□ -0.13
PRPF4-202ENST00000374199 TMEM260Q9NX78 707 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 FAM196BA6NMK8 535 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 BIN1O00499 593 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 WNT10BO00744 389 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 AP3B2Q13367 1082 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 DLGAP5Q15398 846 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 CUL5Q93034 780 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 KCNMB3Q9NPA1 279 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 GPCPD1Q9NPB8 672 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
PRPF4-202ENST00000374199 BECN2A8MW95 431 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 RAD17O75943 681 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 USP11P51784 963 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 EIF6P56537 245 aaKnown RBP14.23□□□□□ -0.13
PRPF4-202ENST00000374199 DHX8Q14562 1220 aaKnown RBP14.23□□□□□ -0.13
PRPF4-202ENST00000374199 TMEM119Q4V9L6 283 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 RBM26Q5T8P6 1007 aaKnown RBP14.23□□□□□ -0.13
PRPF4-202ENST00000374199 LRRC8AQ8IWT6 810 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 DPF2Q92785 391 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 P2RX7Q99572 595 aaKnown RBP14.23□□□□□ -0.13
PRPF4-202ENST00000374199 TAOK3Q9H2K8 898 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 TMX1Q9H3N1 280 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 TTC12Q9H892 705 aaPredicted RBP14.23□□□□□ -0.13
PRPF4-202ENST00000374199 LRRC10BA6NIK2 292 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 CCZ1BP86790 482 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 CCZ1P86791 482 aaPredicted RBP14.23□□□□□ -0.13
PRPF4-202ENST00000374199 FOXR2Q6PJQ5 311 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 KCTD1Q719H9 257 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 HAS1Q92839 578 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 CCDC34Q96HJ3 373 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 C7orf25Q9BPX7 421 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 RANBP17Q9H2T7 1088 aaKnown RBP14.23□□□□□ -0.13
PRPF4-202ENST00000374199 ZBTB21Q9ULJ3 1066 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 LOXHD1Q8IVV2 1947 aa14.23□□□□□ -0.13
PRPF4-202ENST00000374199 SLC37A4O43826 429 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 RHOBTB3O94955 611 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 GH2P01242 217 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 PTGS1P23219 599 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 CIITAP33076 1130 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 PBX1P40424 430 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 RBM5P52756 815 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF4-202ENST00000374199 CDC37Q16543 378 aaPredicted RBP14.22□□□□□ -0.13
PRPF4-202ENST00000374199 MYOZ2Q9NPC6 264 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 PYCARDQ9ULZ3 195 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 CYP3A4P08684 503 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 ATP2B1P20020 1258 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 FANCCQ00597 558 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 EHHADHQ08426 723 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 ZNF658Q5TYW1 1059 aaPredicted RBP14.22□□□□□ -0.13
PRPF4-202ENST00000374199 HOMER1Q86YM7 354 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 CACTINQ8WUQ7 758 aaKnown RBP14.22□□□□□ -0.13
PRPF4-202ENST00000374199 XPO4Q9C0E2 1151 aaKnown RBP14.22□□□□□ -0.13
PRPF4-202ENST00000374199 BIN2Q9UBW5 565 aaPredicted RBP14.22□□□□□ -0.13
PRPF4-202ENST00000374199 SLC1A4P43007 532 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 Q4G0T1 1027 aa14.22□□□□□ -0.13
PRPF4-202ENST00000374199 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF4-202ENST00000374199 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
PRPF4-202ENST00000374199 CCNT1O60563 726 aaKnown RBP14.21□□□□□ -0.13
PRPF4-202ENST00000374199 ATP1A3P13637 1013 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 CAP2P40123 477 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 MRPL12P52815 198 aaKnown RBP14.21□□□□□ -0.13
PRPF4-202ENST00000374199 SYDE2Q5VT97 1194 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 CIAPIN1Q6FI81 312 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 CCDC186Q7Z3E2 898 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 A0A1B0GTH6 734 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 MPHOSPH10O00566 681 aaKnown RBP14.21□□□□□ -0.13
PRPF4-202ENST00000374199 GDF11O95390 407 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 GSDMDP57764 484 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 VSTM4Q8IW00 320 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 LENG9Q96B70 501 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 GTPBP4Q9BZE4 634 aaKnown RBP14.21□□□□□ -0.13
PRPF4-202ENST00000374199 FANCLQ9NW38 375 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 RWDD2AQ9UIY3 292 aa14.21□□□□□ -0.13
PRPF4-202ENST00000374199 OTOFQ9HC10 1997 aa14.21□□□□□ -0.14
PRPF4-202ENST00000374199 BMP3P12645 472 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 SLC16A2P36021 539 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 SPIRE1Q08AE8 756 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 TNIP1Q15025 636 aa14.2□□□□□ -0.14
PRPF4-202ENST00000374199 SPATA1Q5VX52 437 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms