RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CCDC93Q567U6 631 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 FAM193BQ96PV7 902 aaPredicted RBP15.72■□□□□ 0.11
TRAF1-201ENST00000373887 NUP58Q9BVL2 599 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 DDX25Q9UHL0 483 aaKnown RBP15.72■□□□□ 0.11
TRAF1-201ENST00000373887 USH1CQ9Y6N9 552 aa15.72■□□□□ 0.11
TRAF1-201ENST00000373887 PRR36Q9H6K5 1346 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 CYP4A11Q02928 519 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 ATP2A3Q93084 1043 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 RIPOR2Q9Y4F9 1068 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 TROVE2P10155 538 aaKnown RBP eCLIP15.71■□□□□ 0.11
TRAF1-201ENST00000373887 CASP2P42575 452 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 SCYL2Q6P3W7 929 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 DCLK2Q8N568 766 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 UBN2Q6ZU65 1347 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 KRT81Q14533 505 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 PLA2G4DQ86XP0 818 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 BLIDQ8IZY5 108 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 SYCE1Q8N0S2 351 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 CAPN7Q9Y6W3 813 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 RGS16O15492 202 aaPredicted RBP15.71■□□□□ 0.11
TRAF1-201ENST00000373887 CACNB3P54284 484 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 MTMR3Q13615 1198 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 ANTXR1Q9H6X2 564 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 FAM207AQ9NSI2 230 aaPredicted RBP15.71■□□□□ 0.11
TRAF1-201ENST00000373887 ATP8A2Q9NTI2 1148 aa15.71■□□□□ 0.11
TRAF1-201ENST00000373887 BZW2Q9Y6E2 419 aaKnown RBP15.71■□□□□ 0.11
TRAF1-201ENST00000373887 KDM5CP41229 1560 aa15.71■□□□□ 0.1
TRAF1-201ENST00000373887 PPP1R12AO14974 1030 aaPredicted RBP15.71■□□□□ 0.1
TRAF1-201ENST00000373887 PRKAB2O43741 272 aa15.71■□□□□ 0.1
TRAF1-201ENST00000373887 OSBPP22059 807 aa15.71■□□□□ 0.1
TRAF1-201ENST00000373887 JADE1Q6IE81 842 aa15.71■□□□□ 0.1
TRAF1-201ENST00000373887 SMIM5Q71RC9 77 aa15.71■□□□□ 0.1
TRAF1-201ENST00000373887 SPDL1Q96EA4 605 aa15.71■□□□□ 0.1
TRAF1-201ENST00000373887 NLRC4Q9NPP4 1024 aa15.71■□□□□ 0.1
TRAF1-201ENST00000373887 KRT3P12035 628 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 VPS41P49754 854 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 EN1Q05925 392 aaPredicted RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 SUSD4Q5VX71 490 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 RRAGAQ7L523 313 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 ARMC9Q7Z3E5 817 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 POMGNT1Q8WZA1 660 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 SERTAD1Q9UHV2 236 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 ABCB4P21439 1286 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 NLRP12P59046 1061 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 TSTA3Q13630 321 aaPredicted RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 NCAPGQ9BPX3 1015 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 LSM14BQ9BX40 385 aaKnown RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 K7ENM7 598 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 RNF40O75150 1001 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 BCRP11274 1271 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 CTNNA1P35221 906 aaKnown RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 GCKP35557 465 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 LIG4P49917 911 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 UHMK1Q8TAS1 419 aaKnown RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 U2AF1L4Q8WU68 220 aaKnown RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 LEMD3Q9Y2U8 911 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 ERBB3P21860 1342 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 TUBB2AQ13885 445 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 POSTNQ15063 836 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 TUBB2BQ9BVA1 445 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 DDX41Q9UJV9 622 aaKnown RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 GADD45BO75293 160 aaPredicted RBP15.7■□□□□ 0.1
TRAF1-201ENST00000373887 IFNB1P01574 187 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 GSTA1P08263 222 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 GSTA2P09210 222 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 USP6P35125 1406 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 DYNLL2Q96FJ2 89 aa15.7■□□□□ 0.1
TRAF1-201ENST00000373887 LRRIQ4A6NIV6 560 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 ATP1A2P50993 1020 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 ADAT2Q7Z6V5 191 aaKnown RBP15.69■□□□□ 0.1
TRAF1-201ENST00000373887 PCDHA1Q9Y5I3 950 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 GNGT1P63211 74 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 DBN1Q16643 649 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 WHAMMP3Q1A5X7 153 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 FANCBQ8NB91 859 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 FAM71BQ8TC56 605 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 POLGP54098 1239 aaPredicted RBP15.69■□□□□ 0.1
TRAF1-201ENST00000373887 LCA5Q86VQ0 697 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 NLRP10Q86W26 655 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 PDCD7Q8N8D1 485 aaKnown RBP15.69■□□□□ 0.1
TRAF1-201ENST00000373887 CYP2D7A0A087X1C5 515 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 TTLL6Q8N841 843 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 CHMP6Q96FZ7 201 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 SEPT9Q9UHD8 586 aaPredicted RBP15.69■□□□□ 0.1
TRAF1-201ENST00000373887 PCDHA12Q9UN75 941 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.69■□□□□ 0.1
TRAF1-201ENST00000373887 SSH3Q8TE77 659 aa15.69■□□□□ 0.1
TRAF1-201ENST00000373887 ADKP55263 362 aaKnown RBP15.68■□□□□ 0.1
TRAF1-201ENST00000373887 PLCB4Q15147 1175 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 MCF2L2Q86YR7 1114 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 HACE1Q8IYU2 909 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 RASGRP4Q8TDF6 673 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 COBLO75128 1261 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 GSPT1P15170 499 aaKnown RBP15.68■□□□□ 0.1
TRAF1-201ENST00000373887 TEKT3Q9BXF9 490 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 DLATP10515 647 aaKnown RBP15.68■□□□□ 0.1
TRAF1-201ENST00000373887 SERPINB6P35237 376 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 PPFIA1Q13136 1202 aa15.68■□□□□ 0.1
TRAF1-201ENST00000373887 HLFQ16534 295 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms