RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 KIF1AQ12756 1690 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 TEX33O43247 280 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 CUL4BQ13620 913 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 ALX1Q15699 326 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 MAP9Q49MG5 647 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 CC2D2BQ6DHV5 1058 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 RRAGAQ7L523 313 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 VPS36Q86VN1 386 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 CEP112Q8N8E3 955 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 SUPT20HQ8NEM7 779 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 IFT81Q8WYA0 676 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 NAPGQ99747 312 aaPredicted RBP8.7□□□□□ -1.02
HERC4-202ENST00000373700 GOPCQ9HD26 462 aa8.7□□□□□ -1.02
HERC4-202ENST00000373700 TRIM49BA6NDI0 452 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 B4DLN1 442 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 PRPF3O43395 683 aaKnown RBP8.69□□□□□ -1.02
HERC4-202ENST00000373700 OR52Z1P0C646 297 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 ARMCX5Q6P1M9 558 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 NEK8Q86SG6 692 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 TMTC1Q8IUR5 882 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 RDH13Q8NBN7 331 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 GJA10Q969M2 543 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 RIOK1Q9BRS2 568 aaKnown RBP8.69□□□□□ -1.02
HERC4-202ENST00000373700 IRX2Q9BZI1 471 aaPredicted RBP8.69□□□□□ -1.02
HERC4-202ENST00000373700 CCDC113Q9H0I3 377 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 ATP6V0A2Q9Y487 856 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 PNPLA7Q6ZV29 1317 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 GTPBP6O43824 516 aaPredicted RBP8.69□□□□□ -1.02
HERC4-202ENST00000373700 CCDC93Q567U6 631 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 SGMS1Q86VZ5 419 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 VSTM4Q8IW00 320 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 SP8Q8IXZ3 490 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 TXLNBQ8N3L3 684 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 OR8K1Q8NGG5 319 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 JAKMIP2Q96AA8 810 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 RGPD5Q99666 1765 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 FLT1P17948 1338 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 USP17L10C9JJH3 530 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 CDC25BP30305 580 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 COPB1P53618 953 aaKnown RBP8.69□□□□□ -1.02
HERC4-202ENST00000373700 CNNM4Q6P4Q7 775 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 GSDMAQ96QA5 445 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 FUCA2Q9BTY2 467 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 PICK1Q9NRD5 415 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 SPTLC3Q9NUV7 552 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 PCDHAC2Q9Y5I4 1007 aa8.69□□□□□ -1.02
HERC4-202ENST00000373700 TCRBV5S4A2TA0A5A2 114 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 MEIS1O00470 390 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 ZMYND10O75800 440 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 NCBP1Q09161 790 aaKnown RBP8.68□□□□□ -1.02
HERC4-202ENST00000373700 MTF1Q14872 753 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 SARM1Q6SZW1 724 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 ENGASEQ8NFI3 743 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 PI4KBQ9UBF8 816 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 PCDHA12Q9UN75 941 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 H7C1D1 291 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 CYP27A1Q02318 531 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 MAATS1Q7Z4T9 603 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 PODNQ7Z5L7 613 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 TPH2Q8IWU9 490 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 ENOX1Q8TC92 643 aaKnown RBP8.68□□□□□ -1.02
HERC4-202ENST00000373700 LRRC27Q9C0I9 530 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 PCDHA4Q9UN74 947 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 RFX7Q2KHR2 1363 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 FLOT1O75955 427 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 FAM13AO94988 1023 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 EEF2P13639 858 aaKnown RBP8.68□□□□□ -1.02
HERC4-202ENST00000373700 CAPN2P17655 700 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 MAGEA1P43355 309 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 FMR1Q06787 632 aaKnown RBP eCLIP8.68□□□□□ -1.02
HERC4-202ENST00000373700 TOGARAM2Q6ZUX3 1019 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 FBXO11Q86XK2 927 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 SLC35F6Q8N357 371 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 TRIML1Q8N9V2 468 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 SCLT1Q96NL6 688 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 PAGR1Q9BTK6 254 aa8.68□□□□□ -1.02
HERC4-202ENST00000373700 TMEM110-MUSTN1A8MSY1 372 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 BACH1O14867 736 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 STX10O60499 249 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 TUBB4AP04350 444 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 MRPS25P82663 173 aaKnown RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 SLC10A5Q5PT55 438 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 CDC42EP5Q6NZY7 148 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 DGKHQ86XP1 1220 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 CCDC65Q8IXS2 484 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 ZNF526Q8TF50 670 aaPredicted RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 CTNNBL1Q8WYA6 563 aaPredicted RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 VEGFAP15692 232 aaPredicted RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 TAL1P17542 331 aaPredicted RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 PLCG1P19174 1290 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 ERCC5P28715 1186 aaPredicted RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 SLC15A2Q16348 729 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 RIC1Q4ADV7 1423 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 DALRD3Q5D0E6 543 aaKnown RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 FBXO38Q6PIJ6 1188 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 NKX2-3Q8TAU0 364 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 ZNF512BQ96KM6 892 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms