RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 PRDM12Q9H4Q4 367 aa9.08□□□□□ -0.96
SP140-202ENST00000373645 MROH8Q9H579 483 aa9.08□□□□□ -0.96
SP140-202ENST00000373645 VCPKMTQ9H867 229 aa9.08□□□□□ -0.96
SP140-202ENST00000373645 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
SP140-202ENST00000373645 ARPP21Q9UBL0 812 aaPredicted RBP9.08□□□□□ -0.96
SP140-202ENST00000373645 ANAPC4Q9UJX5 808 aa9.08□□□□□ -0.96
SP140-202ENST00000373645 TBX21Q9UL17 535 aa9.08□□□□□ -0.96
SP140-202ENST00000373645 SNX14Q9Y5W7 946 aa9.08□□□□□ -0.96
SP140-202ENST00000373645 FAM205CA6NFA0 338 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 MINDY4BA8MYZ0 360 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 SNAI1O95863 264 aaPredicted RBP9.07□□□□□ -0.96
SP140-202ENST00000373645 CSF2RAP15509 400 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 PTGS1P23219 599 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 ACLYP53396 1101 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 HAND2P61296 217 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 PPARAQ07869 468 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 CCDC85BQ15834 202 aaPredicted RBP9.07□□□□□ -0.96
SP140-202ENST00000373645 C12orf60Q5U649 245 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 CCSAPQ6IQ19 270 aaPredicted RBP9.07□□□□□ -0.96
SP140-202ENST00000373645 ANKRD33Q7Z3H0 272 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 RIOX2Q8IUF8 465 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 IL27Q8NEV9 243 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 FGD4Q96M96 766 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 NECAB3Q96P71 396 aaPredicted RBP9.07□□□□□ -0.96
SP140-202ENST00000373645 NUP88Q99567 741 aaPredicted RBP9.07□□□□□ -0.96
SP140-202ENST00000373645 PPP1R12CQ9BZL4 782 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 STARD7Q9NQZ5 370 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 SLC5A4Q9NY91 659 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 ZNF214Q9UL59 606 aaPredicted RBP9.07□□□□□ -0.96
SP140-202ENST00000373645 ADAMTS5Q9UNA0 930 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 TMX2Q9Y320 296 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 RIPK3Q9Y572 518 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 CHD7Q9P2D1 2997 aa9.07□□□□□ -0.96
SP140-202ENST00000373645 GBF1Q92538 1859 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 E7EWF7 191 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 RBAK-RBAKDNI3L0D1 243 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 VWA5AO00534 786 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 WDR46O15213 610 aaKnown RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 RAD21O60216 631 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 SLC3A2P08195 630 aaKnown RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 EEF2P13639 858 aaKnown RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 AKR1A1P14550 325 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 PSMA5P28066 241 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 CTDSPL2Q05D32 466 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 KCNA10Q16322 511 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 TMEM240Q5SV17 173 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 FAM83BQ5T0W9 1011 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 AKNAD1Q5T1N1 836 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 RNF180Q86T96 592 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 KLHDC9Q8NEP7 349 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 ADAMTS19Q8TE59 1207 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 STAG1Q8WVM7 1258 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 SYMPKQ92797 1274 aaKnown RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 FAM212AQ96EL1 285 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 KIF2CQ99661 725 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 TM6SF1Q9BZW5 370 aa9.06□□□□□ -0.96
SP140-202ENST00000373645 RNF41Q9H4P4 317 aaPredicted RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 CXXC1Q9P0U4 656 aaPredicted RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 ZHX1Q9UKY1 873 aaPredicted RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 DDX49Q9Y6V7 483 aaKnown RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
SP140-202ENST00000373645 UMODL1Q5DID0 1318 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 CHD9Q3L8U1 2897 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 DCDC2CA8MYV0 355 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 TIMP1P01033 207 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 HMGB1P09429 215 aaKnown RBP9.05□□□□□ -0.96
SP140-202ENST00000373645 FGRP09769 529 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 PCP11498 1178 aaKnown RBP9.05□□□□□ -0.96
SP140-202ENST00000373645 STAT3P40763 770 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 CDK8P49336 464 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 TRDNQ13061 729 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 KCTD2Q14681 263 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 ADCK5Q3MIX3 580 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 RASIP1Q5U651 963 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 MFSD6Q6ZSS7 791 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 ZNF365Q70YC5 407 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 NCOA7Q8NI08 942 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 NEK1Q96PY6 1258 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.05□□□□□ -0.96
SP140-202ENST00000373645 CNNM2Q9H8M5 875 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 ZNF287Q9HBT7 754 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 ARHGEF10LQ9HCE6 1279 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 NRBP1Q9UHY1 535 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 PPP1R9AQ9ULJ8 1098 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 YBX2Q9Y2T7 364 aaKnown RBP9.05□□□□□ -0.96
SP140-202ENST00000373645 TAF6LQ9Y6J9 622 aa9.05□□□□□ -0.96
SP140-202ENST00000373645 GREB1LQ9C091 1923 aaPredicted RBP9.05□□□□□ -0.96
SP140-202ENST00000373645 PRRC2BQ5JSZ5 2229 aaKnown RBP9.04□□□□□ -0.96
SP140-202ENST00000373645 DNAJC25-GNG10A0A024R161 153 aa9.04□□□□□ -0.96
SP140-202ENST00000373645 CTAGE5O15320 804 aa9.04□□□□□ -0.96
SP140-202ENST00000373645 SLC25A27O95847 323 aa9.04□□□□□ -0.96
SP140-202ENST00000373645 C6orf222P0C671 652 aaPredicted RBP9.04□□□□□ -0.96
SP140-202ENST00000373645 CYP2C18P33260 490 aa9.04□□□□□ -0.96
SP140-202ENST00000373645 NT5C2P49902 561 aa9.04□□□□□ -0.96
SP140-202ENST00000373645 PDE4BQ07343 736 aa9.04□□□□□ -0.96
SP140-202ENST00000373645 RABEP1Q15276 862 aa9.04□□□□□ -0.96
SP140-202ENST00000373645 SNRNP48Q6IEG0 339 aaKnown RBP9.04□□□□□ -0.96
SP140-202ENST00000373645 MFSD5Q6N075 450 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms