RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ABL1P00519 1130 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 TOP1P11387 765 aaKnown RBP7.24□□□□□ -1.25
CHD6-202ENST00000373222 ZNF18P17022 549 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 MCM7P33993 719 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 CAVIN4Q5BKX8 364 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 RCSD1Q6JBY9 416 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 USP17L1Q7RTZ2 530 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 MTERF4Q7Z6M4 381 aaKnown RBP7.24□□□□□ -1.25
CHD6-202ENST00000373222 TC2NQ8N9U0 490 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 CCDC150Q8NCX0 1101 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 KIF18AQ8NI77 898 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 TNFRSF25Q93038 417 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 SMARCE1Q969G3 411 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 PLIN2Q99541 437 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 RNF26Q9BY78 433 aaPredicted RBP7.24□□□□□ -1.25
CHD6-202ENST00000373222 RNF41Q9H4P4 317 aaPredicted RBP7.24□□□□□ -1.25
CHD6-202ENST00000373222 ZNF446Q9NWS9 450 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 RTL9Q8NET4 1388 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 TRIM75PA6NK02 468 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 KRT2P35908 639 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 RPS8P62241 208 aaKnown RBP7.24□□□□□ -1.25
CHD6-202ENST00000373222 UBE4AQ14139 1066 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 KARSQ15046 597 aaKnown RBP7.24□□□□□ -1.25
CHD6-202ENST00000373222 SF3B3Q15393 1217 aaKnown RBP7.24□□□□□ -1.25
CHD6-202ENST00000373222 TMTC3Q6ZXV5 915 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 APTXQ7Z2E3 356 aaKnown RBP7.24□□□□□ -1.25
CHD6-202ENST00000373222 WASF1Q92558 559 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 PAGE5Q96GU1 130 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 TRIM34Q9BYJ4 488 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 IL17RBQ9NRM6 502 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 ANAPC4Q9UJX5 808 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 PRDM4Q9UKN5 801 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.24□□□□□ -1.25
CHD6-202ENST00000373222 CDK5RAP2Q96SN8 1893 aa7.24□□□□□ -1.25
CHD6-202ENST00000373222 RNF225M0QZC1 329 aaPredicted RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 GOLGA8HP0CJ92 632 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 TPM4P67936 248 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 AKAP17AQ02040 695 aaKnown RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 BMS1Q14692 1282 aaKnown RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 GRIPAP1Q4V328 841 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 ZNF746Q6NUN9 644 aaPredicted RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 CATIPQ7Z7H3 387 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 NBPF5PQ86XG9 351 aaPredicted RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 CREBRFQ8IUR6 639 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 LRRC15Q8TF66 581 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 BRINP2Q9C0B6 783 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 CDHR5Q9HBB8 845 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 MCM9Q9NXL9 1143 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 SAP30BPQ9UHR5 308 aaKnown RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 PRR12Q9ULL5 1215 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 XDHP47989 1333 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 AHDC1Q5TGY3 1603 aaPredicted RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 BTAF1O14981 1849 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 MYH1P12882 1939 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 CCDC196A0A1B0GTZ2 297 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 TM4SF1P30408 202 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 HIBADHP31937 336 aaKnown RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 CCT6AP40227 531 aaKnown RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 TBX2Q13207 712 aaPredicted RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 CUL4BQ13620 913 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 CCDC93Q567U6 631 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 TTC38Q5R3I4 469 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 NT5DC1Q5TFE4 455 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 IQCA1Q86XH1 822 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 SPATA20Q8TB22 786 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 SH3RF3Q8TEJ3 882 aaPredicted RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 MRPL44Q9H9J2 332 aaKnown RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 PCDH12Q9NPG4 1184 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 GNL3LQ9NVN8 582 aaKnown RBP7.23□□□□□ -1.25
CHD6-202ENST00000373222 ZNF652Q9Y2D9 606 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 PPP2R2CQ9Y2T4 447 aa7.23□□□□□ -1.25
CHD6-202ENST00000373222 TSPY2A6NKD2 308 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 GOLGA8CPA6NN73 597 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 NKRFO15226 690 aaKnown RBP eCLIP7.22□□□□□ -1.251e-8■■□□□ 11.6
CHD6-202ENST00000373222 PRPF3O43395 683 aaKnown RBP7.22□□□□□ -1.25
CHD6-202ENST00000373222 ATP9BO43861 1147 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 SLU7O95391 586 aaKnown RBP7.22□□□□□ -1.25
CHD6-202ENST00000373222 SLURP2P0DP57 97 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 TNNI2P48788 182 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 PLCD1P51178 756 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 TSHZ1Q6ZSZ6 1077 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 BRIP1Q9BX63 1249 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 CAPN10Q9HC96 672 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 CTNND2Q9UQB3 1225 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 MRPL42Q9Y6G3 142 aaKnown RBP7.22□□□□□ -1.25
CHD6-202ENST00000373222 TRIM49BA6NDI0 452 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 PPP1R3GB7ZBB8 358 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 CYTH3O43739 400 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 URI1O94763 535 aaPredicted RBP7.22□□□□□ -1.25
CHD6-202ENST00000373222 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
CHD6-202ENST00000373222 TFAP4Q01664 338 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 RBL2Q08999 1139 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 SLC43A3Q8NBI5 491 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 SPIRE2Q8WWL2 714 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 SETDB2Q96T68 719 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 BAG1Q99933 345 aaPredicted RBP7.22□□□□□ -1.25
CHD6-202ENST00000373222 CARD6Q9BX69 1037 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 L2HGDHQ9H9P8 463 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 KCND1Q9NSA2 647 aa7.22□□□□□ -1.25
CHD6-202ENST00000373222 GDAQ9Y2T3 454 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms