RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TAOK1Q7L7X3 1001 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 U2AF1L4Q8WU68 220 aaKnown RBP13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 E9PCH4 1651 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 ATP8B1O43520 1251 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 FKBP3Q00688 224 aaKnown RBP13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 C10orf67Q8IYJ2 551 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 CCDC105Q8IYK2 499 aa13.06□□□□□ -0.32
DEPDC1-201ENST00000370966 ABCB5Q2M3G0 1257 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 STAG1Q8WVM7 1258 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 KANSL2Q9H9L4 492 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 FAM169AQ9Y6X4 670 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 STK36Q9NRP7 1315 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 POLR2FP61218 127 aaKnown RBP13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 PLA2G4DQ86XP0 818 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 RDH13Q8NBN7 331 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 FAM184BQ9ULE4 1060 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 VGLL3A8MV65 326 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 CYP2J2P51589 502 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 BRDTQ58F21 947 aaPredicted RBP13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 BRINP3Q76B58 766 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 VSTM4Q8IW00 320 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 ARHGEF40Q8TER5 1519 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 TMEM232C9JQI7 657 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 PTPREP23469 700 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 FAM196AQ6ZSG2 479 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 AIFM3Q96NN9 605 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 TEKT3Q9BXF9 490 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 FAM204AQ9H8W3 233 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 MED4Q9NPJ6 270 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 RWDD2AQ9UIY3 292 aa13.05□□□□□ -0.32
DEPDC1-201ENST00000370966 SERPINB2P05120 415 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 ALX1Q15699 326 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 MAN2A1Q16706 1144 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 PLCB1Q9NQ66 1216 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 KRT71Q3SY84 523 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 RASGRP4Q8TDF6 673 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 TBCKQ8TEA7 893 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 VTI1AQ96AJ9 217 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 ISCA1Q9BUE6 129 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 KCNK3O14649 394 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 TNNI1P19237 187 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 CCNE1P24864 410 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 EXOC3L4Q17RC7 722 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 INTS8Q75QN2 995 aaKnown RBP13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 IPO4Q8TEX9 1081 aaKnown RBP13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 PPM1EQ8WY54 764 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 RABGAP1Q9Y3P9 1069 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 IVNS1ABPQ9Y6Y0 642 aa13.04□□□□□ -0.32
DEPDC1-201ENST00000370966 SEPT2Q15019 361 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 LONRF2Q1L5Z9 754 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 TRIM7Q9C029 511 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 ABCA9Q8IUA7 1624 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 PPFIA4O75335 1185 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 CYP2E1P05181 493 aaPredicted RBP13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 ALAS1P13196 640 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 CD19P15391 556 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 ARHGAP25P42331 645 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 YWHAEP62258 255 aaKnown RBP13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 HLFQ16534 295 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 CABS1Q96KC9 395 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 KIF2CQ99661 725 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 PABPN1LA6NDY0 278 aaKnown RBP13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 TRIM37O94972 964 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 AOC3Q16853 763 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 RABL6Q3YEC7 729 aaPredicted RBP13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 INPP5BP32019 993 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 MECOMQ03112 1051 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 DEPTORQ8TB45 409 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 STIM2Q9P246 746 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 SSX2IPQ9Y2D8 614 aa13.03□□□□□ -0.32
DEPDC1-201ENST00000370966 CRB1P82279 1406 aa13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 GAP43P17677 238 aa13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 LACTBP83111 547 aaPredicted RBP13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 RBL2Q08999 1139 aa13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 CEP57Q86XR8 500 aa13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 ZNF354CQ86Y25 554 aa13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 SLC35F6Q8N357 371 aa13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 GPATCH11Q8N954 259 aa13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 CCDC97Q96F63 343 aaPredicted RBP13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 PALLDQ8WX93 1383 aa13.02□□□□□ -0.32
DEPDC1-201ENST00000370966 KRIT1O00522 736 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 ABCB4P21439 1286 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 GRAPQ13588 217 aa13.02□□□□□ -0.33
DEPDC1-201ENST00000370966 RESP18Q5W5W9 173 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms