RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PCP11498 1178 aaKnown RBP18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 IFNAR1P17181 557 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 PHKA1P46020 1223 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 EXOC3L4Q17RC7 722 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 ERVV-2B6SEH9 535 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 CXCR5P32302 372 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 PSMD6Q15008 389 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 E2F5Q15329 346 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 CCDC144BQ3MJ40 725 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 ALS2CLQ60I27 953 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 CTAGE3PQ8IX95 158 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 PASKQ96RG2 1323 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 MBD5Q9P267 1494 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 CFBP00751 764 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 RPAINQ86UA6 219 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 TCP11Q8WWU5 503 aa18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 SRPRBQ9Y5M8 271 aaKnown RBP18.78■□□□□ 0.6
PTP4A1-201ENST00000370651 LAD1O00515 517 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 CLGNO14967 610 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 PDE8BO95263 885 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 MAN2A1Q16706 1144 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 GEN1Q17RS7 908 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 ARMC9Q7Z3E5 817 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 OSBPL5Q9H0X9 879 aaPredicted RBP18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 MFAP3LO75121 409 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 RPSAP08865 295 aaKnown RBP18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 CD19P15391 556 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 PALM2Q8IXS6 379 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 NUF2Q9BZD4 464 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 ODF2LQ9ULJ1 636 aa18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 CFAP65Q6ZU64 1925 aaKnown RBP18.77■□□□□ 0.6
PTP4A1-201ENST00000370651 SH2B2O14492 632 aaPredicted RBP18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 STK10O94804 968 aaKnown RBP18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 GOLGA8HP0CJ92 632 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 PHBP35232 272 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 MAGEA9P43362 315 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 GYG1P46976 350 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 E2F4Q16254 413 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 IWS1Q96ST2 819 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 BTG4Q9NY30 223 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 ABCC12Q96J65 1359 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 PGRMC1O00264 195 aaKnown RBP18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 SASH1O94885 1247 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 TRIM37O94972 964 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 OSBP2Q969R2 916 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 PSTPIP2Q9H939 334 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 NHEJ1Q9H9Q4 299 aaPredicted RBP18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 DAAM1Q9Y4D1 1078 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 FRMD3A2A2Y4 597 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 MORC2Q9Y6X9 1032 aaPredicted RBP18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 CTNND1O60716 968 aaKnown RBP18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 MOCS3O95396 460 aa18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 TOB2Q14106 344 aaPredicted RBP18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 RBM26Q5T8P6 1007 aaKnown RBP18.76■□□□□ 0.59
PTP4A1-201ENST00000370651 NR1D1P20393 614 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 SESN3P58005 492 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 MAGOHBQ96A72 148 aaKnown RBP18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 AK8Q96MA6 479 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 AIFM3Q96NN9 605 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 COL4A3BPQ9Y5P4 624 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 GAS7O60861 476 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 N4BP1O75113 896 aaKnown RBP18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 ATF2P15336 505 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 MYL1P05976 194 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 SNX16P57768 344 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 CYP27A1Q02318 531 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 CASC4Q6P4E1 433 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 CEP120Q8N960 986 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 LARP4BQ92615 738 aaKnown RBP18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 ATP2A3Q93084 1043 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 DDX25Q9UHL0 483 aaKnown RBP18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 ATP8A1Q9Y2Q0 1164 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 ATP7BP35670 1465 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 CPSF1Q10570 1443 aaKnown RBP18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 ARHGAP42A6NI28 874 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 PRR16Q569H4 304 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 JPH2Q9BR39 696 aaPredicted RBP18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 ACTR5Q9H9F9 607 aaPredicted RBP18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 PCDHB6Q9Y5E3 794 aa18.75■□□□□ 0.59
PTP4A1-201ENST00000370651 MYCLP12524 364 aaPredicted RBP18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 EMBQ6PCB8 327 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 TOGARAM2Q6ZUX3 1019 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 BBOF1Q8ND07 529 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 LRRC8CQ8TDW0 803 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 EIF4A3P38919 411 aaKnown RBP18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 RPS8P62241 208 aaKnown RBP18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 IRX4P78413 519 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 SLFN12Q8IYM2 578 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 WHAMMQ8TF30 809 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 RSAD2Q8WXG1 361 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 BCAP29Q9UHQ4 241 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 USP27XA6NNY8 438 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 TNNI1P19237 187 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 TRAPPC3LQ5T215 181 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 MAP3K21Q5TCX8 1036 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 CAPN12Q6ZSI9 719 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 PAGE5Q96GU1 130 aa18.74■□□□□ 0.59
PTP4A1-201ENST00000370651 KIF2CQ99661 725 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms