RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ODR4Q5SWX8 454 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 MIS18BP1Q6P0N0 1132 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 SYMPKQ92797 1274 aaKnown RBP9.38□□□□□ -0.91
ABCA4-201ENST00000370225 DYNLL2Q96FJ2 89 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 SMYD2Q9NRG4 433 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 ZBTB7AO95365 584 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 TTLL1O95922 423 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 RSPH3Q86UC2 560 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 AFAP1L1Q8TED9 768 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 DNMT1P26358 1616 aaKnown RBP9.38□□□□□ -0.91
ABCA4-201ENST00000370225 PRKAB2O43741 272 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 XPAP23025 273 aaPredicted RBP9.38□□□□□ -0.91
ABCA4-201ENST00000370225 CACNB3P54284 484 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 ADAM9Q13443 819 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 RPS6KA2Q15349 733 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 RSRC2Q7L4I2 434 aaKnown RBP9.38□□□□□ -0.91
ABCA4-201ENST00000370225 COA7Q96BR5 231 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 SLC10A4Q96EP9 437 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 IWS1Q96ST2 819 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 PTPN22Q9Y2R2 807 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 PPME1Q9Y570 386 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 CLIC4Q9Y696 253 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 BTBD18B2RXH4 712 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 PTGDRQ13258 359 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 TFDP1Q14186 410 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 UHMK1Q8TAS1 419 aaKnown RBP9.38□□□□□ -0.91
ABCA4-201ENST00000370225 CYP2D7A0A087X1C5 515 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 PDE8BO95263 885 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 HADHQ16836 314 aaKnown RBP9.37□□□□□ -0.91
ABCA4-201ENST00000370225 CFAP221Q4G0U5 840 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 DENND2CQ68D51 928 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 C7orf31Q8N865 590 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 DESI2Q9BSY9 194 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 TPCN1Q9ULQ1 816 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 PLEKHG3A1L390 1219 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 THAP12O43422 761 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 GSTA1P08263 222 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 GSTA2P09210 222 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 STAT2P52630 851 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 GBP6Q6ZN66 633 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 ARFGAP2Q8N6H7 521 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 ADCY9O60503 1353 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 ZMYM4Q5VZL5 1548 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 USP17L8P0C7I0 530 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 HOXA13P31271 388 aaPredicted RBP9.37□□□□□ -0.91
ABCA4-201ENST00000370225 ARHGEF6Q15052 776 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 MTERF2Q49AM1 385 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 PI16Q6UXB8 463 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 ARMCX3Q9UH62 379 aaPredicted RBP9.37□□□□□ -0.91
ABCA4-201ENST00000370225 SPDYE2BA6NHP3 402 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 SPDYE6P0CI01 402 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 MYL7Q01449 175 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 SH2D4BQ5SQS7 431 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 LGSNQ5TDP6 509 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 CCDC170Q8IYT3 715 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 ANKRD36BP1Q96IX9 119 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 ZBED2Q9BTP6 218 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 SNX25Q9H3E2 840 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 PLXNC1O60486 1568 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 A6NJR5 290 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 RPN1P04843 607 aaKnown RBP9.37□□□□□ -0.91
ABCA4-201ENST00000370225 ATP11AP98196 1134 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 LRRC41Q15345 812 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 UBE2SQ16763 222 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 PTPN21Q16825 1174 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 CCDC62Q6P9F0 684 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 TMTC1Q8IUR5 882 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 MAD1L1Q9Y6D9 718 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 CLIC2O15247 247 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 SRGAP2CP0DJJ0 459 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 NAA35Q5VZE5 725 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 MCUR1Q96AQ8 359 aa9.37□□□□□ -0.91
ABCA4-201ENST00000370225 TUBB4AP04350 444 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 USP14P54578 494 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 SARNPP82979 210 aaKnown RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 LLGL1Q15334 1064 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 CCDC93Q567U6 631 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 MYSM1Q5VVJ2 828 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 METTL23Q86XA0 190 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 PIGSQ96S52 555 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 AMNQ9BXJ7 453 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 XPO4Q9C0E2 1151 aaKnown RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 KMT5AQ9NQR1 393 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 DDAH1O94760 285 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 TRIM56Q9BRZ2 755 aaKnown RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 DPH5Q9H2P9 285 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 ZNF277Q9NRM2 450 aaPredicted RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 LEMD3Q9Y2U8 911 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 NOC2LQ9Y3T9 749 aaKnown RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 H7C0C1 242 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 ATP5OP48047 213 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 IREB2P48200 963 aaKnown RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 TFAMQ00059 246 aaKnown RBP9.36□□□□□ -0.91
ABCA4-201ENST00000370225 ELF2Q15723 593 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 RFX6Q8HWS3 928 aa9.36□□□□□ -0.91
ABCA4-201ENST00000370225 FTOQ9C0B1 505 aaKnown RBP eCLIP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms